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bioRxivMicrobiologyPreprint

It happened again - emergence of a Shamonda-like orthobunyavirus in Central Europe, 2026

Kerstin WernikeiD, Bernd HoffmanniD, Ellen Kathrin Link, Simon Rotheneder, Mirette I. Y. EshakiD, Florian PfaffiD, Dirk Hoeper, Martin BeeriD

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Abstract

Since mid-June 2026, an acute, non-fatal syndrome with high herd morbidity, reduced milk yield, diarrhea, fever and lethargy affected dairy cattle in southern Germany and Switzerland. Major viral pathogens were excluded. Pan-Simbuvirus PCR first detected an orthobunyavirus, subsequently confirmed by metagenomic sequencing, which enabled recovery of a complete "Shamonda-like" genome. One sentence summary lineMore than a decade after the emergence of Schmallenberg virus in 2011, a novel "Shamonda-like" orthobunyavirus of the Simbu serogroup has now emerged in Central Europe.

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