medRxivGenetic & Genomic MedicinePreprint
Investigating the potential of clinical variables and ace2/tmprss2 genetic variants as a biomarkers for COVID-19 and malaria co-infection in Cameroon
Eric Berenger TchoupeiD, Mary Ngongang KameniiD, MacDonald Bin EriciD, Jean Bosco Taya-FokouiD, Séverin Donald KamdemiD, Leonard Numfor Nkah, Vicky Jocélyne Ama MooriD, Arnaud TepaiD, Fuh Roger NebaiD, Anthony Afum-Adjei AwuahiD, John AmuasiiD, Palmer Masumbe NetongoiD
- Citations
- 0
Abstract
Malaria and COVID-19 dual infections can worsen the severity of both diseases and lead to misdiagnosis due to overlapping symptoms. It is reported that SARS-CoV-2 may affect malaria progression through the renin-angiotensin system. A total of 96 participants aged 15 to 64 years were retained and divided into four groups: COVID-19 (28), malaria (28), co-infection (16), and controls (24). Blood and nasopharyngeal samples were tested for both diseases using RDT and RT-PCR. Disease severity markers were assessed using spectrophotometry and ELISA while genetic variations in ace2 and tmprss2 genes were analyzed using qPCR. Data were analyzed using GraphPad Prism version 9.0. Statistical significance was set at p<0.05. Significant increases in biochemical markers (ALT, AST, urea, creatinine, and erythropoietin) were observed in the co-infected group compared to others groups. While inflammatory cytokines (IL-4, IL6, and IL-10) levels were higher in malaria cohort, the ACE2 biomarker showed strong discriminatory capacity for predicting disease severity, with AUCs of 0.77 for malaria and 0.85 for COVID-19. Additionally, ACE2 genetic mutations correlated with higher vascular markers (ANG2 and ACE2). This research explored the role of single nucleotide polymorphisms (SNPs) in ace2/tmprss2 in malaria and COVID-19 co-infection severity.
- organism: human
- assay: bulk RNA-seq
- research focus: differential expression
- research focus: benchmarking
- research focus: gene regulatory network inference
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Transcriptional Profiles Analysis of COVID-19 and Malaria Patients Reveals Potential Biomarkers in Children
Nzungize Lambert, Jonas Arnaud Kengne-Ouafo, … Allissa Dillman·bioRxiv·Jun 30, 2022
- Lack of association between genetic variants at ACE2 and TMPRSS2 genes involved in SARS-CoV-2 infection and human quantitative phenotypes
Esteban A. Lopera-Maya, Adriaan van der Graaf, … Serena Sanna·Frontiers in GeneticsPeer-reviewed·Jun 8, 2020
- Polymorphisms in the ACE2 Locus Associate with Severity of COVID-19 Infection
Luke T. Wooster, Christopher Nicholson, … Rajeev Kumar Malhotra·medRxiv·Jun 18, 2020
- ACE2 and TMPRSS2 variants and expression as candidates to sex and country differences in COVID-19 severity in Italy
Rosanna Asselta, Elvezia Maria Paraboschi, … Stefano Duga·AgingPeer-reviewed·Jun 5, 2020
- Susceptibilities of human ACE2 genetic variants in coronavirus infection
- Angiotensin-converting enzyme (ACE1, ACE2) gene variants are associated with COVID19 severity depending on the hypertension status.
Juan Gómez, Guillermo M. Albaiceta, … Eliécer Coto·GenePeer-reviewed·Aug 31, 2020