bioRxivCell BiologyPreprint
Label free 3D analysis of organelles in living cells by refractive index shows pre-mitotic organelle spinning in mammalian stem cells
Patrick A. Sandoz, Christopher Tremblay, Sebastien Equis, Sorin Pop, Lisa Pollaro, Yann Cotte, F. Gisou van der Goot, Mathieu Frechin
Abstract
Holo-tomographic microscopy (HTM) is a label-free non-phototoxic microscopy method reporting the fine changes of a cells refractive indexes (RI) in 3D. By combining HTM with epifluorescence, we demonstrate that cellular organelles such as Lipid droplets and mitochondria show a specific RI signature that distinguishes them with high resolution and contrast. We further show that HTM allows to follow in unprecedented ways the dynamics of mitochondria, lipid droplets as well as that of endocytic structures in live cells over long period of time, which led us to observe to our knowledge for the first time a global organelle spinning occurring before mitosis.
- organism: mouse
- assay: imaging
- research focus: cell type annotation
- approach: microscopy & imaging analysis
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Holotomographic microscopy reveals label-free quantitative dynamics of endothelial cells during endothelialization
William D. Leineweber, Gabriela Acevedo Munares, … Patrick Jurney·European Journal of Cell BiologyPeer-reviewed·Apr 22, 2025
- Tracking-based rolling angles recovery method for holographic tomography of flowing cells
D. Pirone, P. Memmolo, … P. Ferraro·bioRxiv·Jun 1, 2021
- Multi-color 4D superresolution light-sheet microscopy reveals organelle interactions at isotropic 100-nm resolution and sub-second timescales
Y. Zhao, M. Zhang, … Y.-H. Zhang·bioRxiv·May 9, 2021
- Label-free quantitative phenotyping of hepatic stellate cell activation using holotomography with AI-enabled subcellular segmentation
Sin‐Hyoung Hong, Junhyung Park, … YongKeun Park·bioRxiv·Jan 27, 2026
- Label-Free Nucleoli Measurement by 3D Holo-Tomographic Flow Cytometry Using Biolens Phase Compensation
Daniele Pirone, Michela Schiavo, … Pietro Ferraro·Advanced PhotonicsPeer-reviewed·Aug 31, 2026
- Lipid droplets 3D full measurement by holographic in-flow tomography
D. Pirone, D. Sirico, … P. Ferraro·bioRxiv·Dec 9, 2021