bioRxivMicrobiology
The impact of HIV-1 within-host evolution on transmission dynamics
K. Theys, P. Libin, A.-C. Pineda-Pena, A. Nowe, A.-M. Vandamme, A. Abecasis
Abstract
The adaptive potential of HIV-1 is a vital mechanism to evade host immune responses and antiviral treatment. However, high evolutionary rates during persistent infection can impair transmission efficiency and alter disease progression in the new host, resulting in a delicate trade-off between within-host virulence and between-host infectiousness. This trade-off is visible in the disparity in evolutionary rates at within-host and between-host levels, and preferential transmission of ancestral donor viruses. Understanding the impact of within-host evolution for epidemiological studies is essential for the design of preventive and therapeutic measures. Herein, we review recent theoretical and experimental work that generated new insights into the complex link between within-host evolution and between-host fitness, revealing temporal and selective processes underlying the structure and dynamics of HIV-1 transmission.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Attenuation of HIV severity by slightly deleterious mutations can explain the long-term trajectory of virulence evolution.
Harriet Longley, Christophe Fraser, … Katrina Lythgoe·PLoS Computational BiologyPeer-reviewed·Dec 1, 2025
- Different evolutionary pathways of HIV-1 between fetus and mother perinatal transmission pairs indicate unique immune selection pressure in fetuses
M. H. Marichannegowda, M. Mengual, … F. Gao·bioRxiv·Aug 28, 2020
- Evolutionary rate shifts suggest species-specific adaptation events in HIV-1 and SIV
M. Gelbart, A. Stern·bioRxiv·Jan 18, 2018
- Untangling the effects of within-host and between-host natural selection in viruses with applications to evolution of HIV-1 co-receptor usage
Kieran O. Drake, Vinícius Bonetti Franceschi, … on behalf of the PANGEA Consortium·Journal of The Royal Society InterfacePeer-reviewed·Sep 9, 2026
- Quantifying the dynamics of viral recombination during free virus and cell-to-cell transmission in HIV-1 infection
J. Kreger, J. Garcia, … D. N. Levy·bioRxiv·Aug 28, 2020
- Synaptic transmission may provide an evolutionary benefit to HIV through modulation of latency
C. Vargas-Garcia, R. Zurakowski, A. Singh·bioRxiv·Jan 5, 2018