bioRxivAnimal Behavior & Cognition
Chipper: Open-source software for semi-automated segmentation and analysis of birdsong and other natural sounds
Abstract
O_LIAudio recording devices have changed significantly over the last 50 years, making large datasets of recordings of natural sounds, such as birdsong, easier to obtain. This increase in digital recordings necessitates an increase in high-throughput methods of analysis for researchers. Specifically, there is a need in the community for open-source methods that are tailored to recordings of varying qualities and from multiple species collected in nature.\nC_LIO_LIWe developed Chipper, a Python-based software to semi-automate both the segmentation of acoustic signals and the subsequent analysis of their frequencies and durations. For avian recordings, we provide widgets to best determine appropriate thresholds for noise and syllable similarity, which aid in calculating note measurements and determining syntax. In addition, we generated a set of synthetic songs with various levels of background noise to test Chippers accuracy, repeatability, and reproducibility.\nC_LIO_LIChipper provides an effective way to quickly generate reproducible estimates of birdsong features. The cross-platform graphical user interface allows the user to adjust parameters and visualize the resulting spectrogram and signal segmentation, providing a simplified method for analyzing field recordings.\nC_LIO_LIChipper streamlines the processing of audio recordings with multiple user-friendly tools and is optimized for multiple species and varying recording qualities. Ultimately, Chipper supports the use of citizen-science data and increases the feasibility of large-scale multi-species birdsong studies.\nC_LI
- assay: proteomics
- research focus: software / tool
- research focus: benchmarking
- approach: experimental assay
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