Statistical analysis of no observed effect concentrations or levels in eco-toxicological assays with overdispersed count endpoints
Abstract
In (eco-)toxicological hazard characterization, the No Observed Adverse Effect Concentration or Level (NOAEC or NOAEL) approach is used and often required despite of its known limitations. For count data, statistical testing can be challenging, due to several confounding factors, such as zero inflation, low observation numbers, variance heterogeneity, over- or under-dispersion when applying the Poisson model or hierarchical experimental designs. As several tests are available for count data, we selected sixteen tests suitable for overdispersed counts and compared them in a simulation study. We assessed their performance considering data sets containing mixing distribution and over-dispersion with different observation numbers. It shows that there is no uniformly best approach because the assumed data conditions and assumptions are very different. However, the Dunnett-type procedure based on most likely transformation can be recommended, because of its size and power behavior, which is relatively better over most data conditions as compared to the available alternative test methods, and because it allows flexible modeling and effect sizes can be estimated by confidence intervals. Related R-code is provided for real data examples.
02 /Specification & Classification
Click any tag to browse matching papers- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- No observed effect concentration (NOEC) and minimal effective dose (MED): estimation of non-experimental doses
L. A. Hothorn·bioRxiv·Aug 23, 2023
- Resource requirements for ecotoxicity testing: A comparison of traditional and new approach methods
- The QNOAEL vs. BMD for Point of Departure
Cynthia Dickerson, Robert A. Lodder·bioRxiv·May 24, 2018
- Equi-Under-Dispersed Possion Distribution (EUPoisson)
Mohamed Yusuf Hassan·bioRxiv·Oct 22, 2024
- Goodness of fit checks for binomial N-mixture models
J. Knape, D. Arlt, … M. Zmihorski·bioRxiv·Sep 27, 2017
- Towards a pragmatic use of statistics in ecology
L. Castilho, P. Prado·bioRxiv·Jul 10, 2018