bioRxivNeurosciencePreprint
Gut microbiome-linked metabolites in the pathobiology of depression and anxiety - a role for bile acids
Siamak MahmoudianDehkordiiD, Sudeepa BhattacharyyaiD, Christopher R. BrydgesiD, Wei Ping JiaiD, Oliver FiehniD, Augustus John RushiD, Boadie Waid DunlopiD, Rima F Kaddurah-DaoukiD
Abstract
BackgroundThe gut microbiome may play a role in the pathogenesis of neuropsychiatric diseases including major depressive disorder (MDD). Bile acids (BAs) are steroid acids that are synthesized in the liver from cholesterol and further processed by gut-bacterial enzymes, thus requiring both human and gut microbiome enzymatic processes in their metabolism. BAs participate in a range of important host functions such as lipid transport and metabolism, cellular signaling and regulation of energy homeostasis. BAs have recently been implicated in the pathophysiology of Alzheimers and several other neuropsychiatric diseases, but the biochemical underpinnings of these gut microbiome-linked metabolites in the pathophysiology of depression and anxiety remains largely unknown. MethodUsing targeted metabolomics, we profiled primary and secondary BAs in the baseline serum samples of 208 untreated outpatients with MDD. We assessed the relationship of BA concentrations and the severity of depressive and anxiety symptoms as defined by the 17-item Hamilton Depression Rating Scale (HRSD17) and the 14-item Hamilton Anxiety Rating Scale (HRSA-Total), respectively. We also evaluated whether the baseline metabolic profile of BA informs about treatment outcomes. ResultsThe concentration of the primary BA chenodeoxycholic acid (CDCA) was significantly lower at baseline in both severely depressed (log2 fold difference (LFD)= -0.48; p=0.021) and highly anxious (LFD= -0.43; p=0.021) participants compared to participants with less severe symptoms. The gut bacteria-derived secondary BAs produced from CDCA such as lithocholic acid (LCA) and several of its metabolites, and their ratios to primary BAs, were significantly higher in the more anxious participants (LFDs range=[0.23,1.36]; ps range=[6.85E-6,1.86E-2]). The interaction analysis of HRSD17 and HRSA-Total suggested that the BA concentration differences were more strongly correlated to the symptoms of anxiety than depression. Significant differences in baseline CDCA (LFD= -0.87, p=0.0009), isoLCA (LFD= -1.08, p=0.016) and several BA ratios (LFDs range [0.46, 1.66], ps range [0.0003, 0.049]) differentiated treatment failures from remitters. ConclusionIn patients with MDD, BA profiles representing changes in gut microbiome compositions are associated with higher levels of anxiety and increased probability of first-line treatment failure. If confirmed, these findings suggest the possibility of developing gut microbiome-directed therapies for MDD characterized by gut dysbiosis.
- organism: human
- assay: metabolomics
- research focus: differential expression
- approach: statistical model
- Citations
- 4
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Medication Use is Associated with Distinct Microbial Features in Anxiety and Depression
A. H. Dilmore, R. Kuplicki, … Alzheimer Gut Microbiome Project Consortium·Molecular PsychiatryPeer-reviewed·Jan 10, 2025
- Gut Microbial Metabolic Disorder in Depression: Insights from Computational Modeling and Mediation Analysis
Yuchen Zhang, Wenkai Lai, … Fenglong Yang·BMC MicrobiologyPeer-reviewed·Apr 14, 2026
- Indoxyl sulfate, a gut microbiome-derived uremic toxin, is associated with psychic anxiety and its functional magnetic resonance imaging-based neurologic signature
Christopher R. Brydges, Oliver Fiehn, … Piero Rinaldo·Scientific ReportsPeer-reviewed·Oct 25, 2021
- Blood metabolomic profiling reveals new targets in the management of psychological symptoms associated with severe alcohol use disorder
Sophie Leclercq, Hany Ahmed, … Nathalie M. Delzenne·eLifePeer-reviewed·Nov 29, 2024
- Association of Bile Acids with Connectivity of Executive Control and Default Mode Networks in Patients with Major Depression
Boadie Waid Dunlop, Jungho Cha, … Rima F Kaddurah-Daouk·bioRxiv·Dec 20, 2024
- Acylcarnitine Metabolomic Profiles Inform Clinically-Defined Major Depressive Phenotypes
A. T. Ahmed, S. MahmoudianDehkordi, … R. Kaddurah-Daouk·bioRxiv·May 9, 2019