PLoS GeneticsGenomicsPeer-reviewed journal article
Varicose veins of lower extremities: insights from the first large-scale genetic study
Alexandra S. ShadrinaiD, Sodbo SharapoviD, Tatiana ShashkovaiD, Yakov A. TsepiloviD
Abstract
Varicose veins of lower extremities (VVs) are a common multifactorial vascular disease. Genetic factors underlying VVs development remain largely unknown. Here we report the first large-scale study of VVs performed on a freely available genetic data of 408,455 European-ancestry individuals. We identified 7 reliably associated loci that explain 10% of the SNP-based heritability, and prioritized the most likely causal genes CASZ1, PPP3R1, EBF1, STIM2, and HFE. Genetic correlation analysis confirmed known epidemiological associations and found genetic overlap with various traits including fluid intelligence score, educational attainment, smoking, and pain. Finally, we observed causal effects of height, weight, both fat and fat-free mass, and plasma levels of MICB and CD209 proteins.
- organism: human
- assay: GWAS summary statistics
- research focus: GWAS / association mapping
- approach: statistical model
- Citations
- 82
- FWCI
- 8.35
- Field percentile
- top 2%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Genome-wide association analysis and replication in 810,625 individuals identifies novel therapeutic targets for varicose veins
Waheed‐Ul‐Rahman Ahmed, Akira Wiberg, … Dominic Furniss·bioRxiv·May 14, 2020
- Identifying Potential Drug Targets for Varicose Veins through Integration of GWAS and eQTL Summary Data
Yu Cui, Mengting Hu, … Shijie Tang·Frontiers in GeneticsPeer-reviewed·May 15, 2024
- Novel Locus Influencing Retinal Venular Tortuosity Is Also Associated With Risk Of Coronary Artery Disease
Abirami Veluchamy, Lucia Ballerini, … Alex S. F. Doney·bioRxiv·Jun 20, 2018
- Genome-wide analysis of 944,133 individuals provides insights into the etiology of hemorrhoidal disease
Tenghao Zheng, David Ellinghaus, … André Franke·GutPeer-reviewed·Apr 22, 2021
- Genome-wide association study of enlarged perivascular spaces: results from two large population-based cohorts
Deborah Früh, Mohammed Aslam Imtiaz, … Monique M.B. Breteler·Cerebral Circulation - Cognition and BehaviorPeer-reviewed·Jan 1, 2025
- Genetic analysis of over one million people identifies 535 novel loci for blood pressure.
E. Evangelou, H. R. Warren, … Verwe·bioRxiv·Oct 11, 2017