bioRxivNeurosciencePreprint
Daily Bowel Movements are Associated with Stronger Gut-Brain Phase-Amplitude Coupling and Better Cognitive Performance
Zeynep ErtürkiD, Klara NielseniD, Louise Margrethe Arildsen JakobseniD, Adam Duun GottliebiD, Hanne Christine BertramiD, Henrik Munch RoageriD, Anke Ninija KarabanoviD
Abstract
Gut-brain communication has emerged as a rapidly expanding field of research, with recent electrophysiological studies revealing rhythmic gut-brain coupling between gastric activity and brain oscillations in humans. Gut motility is a key determinant of gastrointestinal function, but it remains unclear whether individual differences in gut motility reflected by weekly bowel movements (e.g., defecation frequency) are associated with differences in gut-brain coupling. Here, we address this question by examining women with self-reported daily bowel movements (N = 38) and women with less frequent bowel movements (N = 38). We recorded simultaneous electroencephalography (EEG) and electrogastrography (EGG) at fasting state, performed cognitive assessments, and analysed faecal short-chain fatty acids (SCFAs) as markers of colonic fermentation. In a subset of participants, EEG-EGG coupling was assessed twice over an interval of at least eight weeks to assess test-retest reliability. In this group, EEG-EGG coupling showed moderate test-retest reliability (Intraclass Correlation Coefficient (ICC) = 0.50). When comparing the two groups of women, the phase-amplitude coupling (PAC) analysis between EEG and EGG signals revealed a significantly stronger gut-brain coupling in women with daily bowel movements compared to women with less frequent bowel movements (p = 0.03). We additionally found that women with daily bowel movements made less errors in the cognitive tasks and had higher levels of faecal SCFAs. A path analysis suggested that bowel movements significantly affect gut-brain phase-amplitude coupling through faecal SCFAs. However, neither faecal SCFAs nor phase-amplitude coupling significantly predicted cognitive performance, suggesting the existence of alternative pathways for the association between bowel movements and cognitive performance. Together, our findings suggest that the strength of gut-brain coupling is associated with bowel movements and cognitive performance, making EEG-EGG coupling a promising marker of human gut-brain interactions.
- organism: human
- assay: metabolomics
- assay: electronic health records
- assay: imaging
- research focus: cell-cell communication
- approach: statistical model
- approach: experimental assay
In-depth summary
Claude Opus 5.5 · xhigh effort · 8 Nov 2026 · from the full text of version 2 (24 Aug 2026) · CC BY 4.0
In 76 healthy middle-aged women, daily bowel movements went with better composite cognitive scores, stronger gastric-phase to EEG-alpha coupling and higher faecal short-chain fatty acids than less-frequent ones.
Coupling between gastric slow waves and brain activity has been proposed as a non-invasive readout of gut-brain communication, but its physiological drivers are poorly understood and some coupling metrics have shown poor test-retest reliability. The work tests retest reliability of EEG-electrogastrogram (EGG) phase-amplitude coupling and asks whether natural variation in bowel movement frequency relates to that coupling, faecal short-chain fatty acids (SCFAs) and cognition.
Key results
SuggestedWomen with daily bowel movements had a better CANTAB-based global cognitive composite than women with less-frequent bowel movements. The difference held after socioeconomic adjustment, but no individual cognitive test differed between the groups.
CANTAB composite z (higher = worse) was lower in the daily group (CI [0.05 0.63], p = 0.02; 38 vs 38 women, 2 excluded from cognitive analyses). It stayed lower after socioeconomic adjustment (β = 0.30, CI [0.03 0.57], p = 0.03). Across participants, weekly bowel movements vs composite: Spearman r = -0.29, p = 0.02. · Women with daily bowel movements show better…; Exploring links between gut- and brain…; Cognitive Tests
SuggestedPhase-amplitude coupling between the gastric rhythm and EEG alpha amplitude over a parieto-frontal electrode cluster was stronger in the daily bowel movement group and rose with weekly bowel movement count. Gastric and alpha peak frequencies did not differ between groups.
Modulation Index (MI) over the region of interest (ROI) found by cluster-based permutation against cross-person surrogates: daily vs less-frequent group r = 0.26, p = 0.03; Spearman bowel movements vs ROI MI r = 0.29, p = 0.01. Between groups, EEG alpha peak frequency p = 0.33 and EGG peak frequency p = 0.93. Coupling was weaker in the Go-No-Go task than at rest (p < 0.005). · Women with daily bowel movements show better…; Exploring links between gut- and brain…; Groups with different BM frequency show similar…; Significance Analysis of Phase Amplitude…
ShownAcross two baseline visits in the less-frequent group, the gastric-alpha MI had moderate test-retest reliability, lower than that of EEG alpha power. The same peak EGG electrode was selected at both visits for 51.6% of participants.
In 31 women (V1 vs V3), intraclass correlation: MI ICC(3,1) = 0.50, 95% CI [0.18, 0.72]; alpha power ICC(3,1) = 0.89 [0.78, 0.94]; peak gastric frequency ICC(3,1) = 0.55 [0.25, 0.76]. The selected EGG electrode agreed exactly in 51.6% of participants. MI tended to be higher at the retest visit (p = 0.05). · Moderate test re-test reliability for modulation…; MI Test-retest reliability; Methods Participants
SuggestedFaecal acetate, propionate and butyrate, quantified by 1H-NMR, were lower in the less-frequent bowel movement group, and all three were positively associated with gut-brain MI.
Group differences (Table 3) are reported as significantly lower in the less-frequent group; Spearman correlations with ROI MI (Table 4) are described as positive associations for all three SCFAs, and Benjamini-Hochberg FDR control was applied to both SCFA analyses. The concentrations, coefficients and p-values are not given in the text. One outlier sample was excluded after its NMR spectrum was reviewed. · Women with daily bowel movements show better…; Exploring links between gut- and brain…; Correlation Analyses; Outlier Handling and Missing Data Imputation
SuggestedIn a path model, bowel movement frequency predicted total faecal SCFA, which in turn predicted MI. Neither SCFA nor MI predicted cognition, while bowel movements kept a direct association with the cognitive composite.
lavaan path analysis, 5000 bootstrap iterations: bowel movements to total SCFA β = 0.26, z = 2.86, p < 0.005; SCFA to MI β = 0.35, z = 3.31, p < 0.005; direct bowel movements to cognition β = -0.25, z = -2.35, p = 0.02; SCFA to cognition β = -0.07, p = 0.55; MI to cognition β = 0.02, p = 0.89; bowel movements to MI β = 0.16, p = 0.09. · Association between Bowel Movements and…; Mediation Analyses
Methods, data and reproducibility
Baseline comparison from the YourGutBrain trial of women with self-reported daily versus less-frequent bowel movements. Measures were a one-week defecation diary, CANTAB cognition, faecal 1H-NMR SCFAs and fasted simultaneous 64-channel EEG with 8-electrode EGG. Coupling was the Modulation Index of gastric phase on alpha amplitude, and reliability came from a second pre-intervention visit.
- Women with self-reported daily bowel movements, YourGutBrain baseline visit (V1) · human · n = 38 (of 40 included) · ClinicalTrials.gov NCT06311097
- Women with self-reported less-frequent bowel movements, baseline visit (V1) · human · n = 38 (of 56 included) · ClinicalTrials.gov NCT06311097
- Test-retest subset of the less-frequent group, pre-intervention visits V1 and V3 · human · n = 31
- Simultaneous 64-channel EEG and 8-electrode abdominal EGG, 15 min eyes-open rest plus 15 min Go-No-Go task, fasted · human · n = 76
- Faecal samples, 1H-NMR quantification of acetate, propionate and butyrate · human
- Methods & tools
- CANTAB (Cambridge Cognition), BioSemi ActiveTwo EEG, Electrogastrogram (BioSemi external electrodes), MATLAB R2023b, EEGLAB 2025.1.0, FieldTrip 20231220, Modulation Index phase-amplitude coupling, 1H-NMR (14 T Bruker Avance III), Chenomx 10.0 Professional, R 4.5.2, lavaan, PSQI, IPAQ, DASS-42 and SF-36 questionnaires
- Data & accessions
- https://github.com/MovementAndNeuroscience/YourGutBrain
- Software & environment
- MATLAB R2023b, EEGLAB 2025.1.0, FieldTrip 20231220, Chenomx 10.0 Professional, R 4.5.2 (lavaan version not given); no container or requirements file stated.
- Reproducibility gaps
- Deidentified data and analysis scripts are described as 'will be made publicly available' at the GitHub repository, not as already released. Appendices, Table S1 and Figures S1-S4 are referenced but not included in the text.
Limitations (6)
- Only healthy middle-aged women were studied, chosen because they more often have infrequent bowel movements, so the findings may not generalize across sexes. · stated by the authors
- Test-retest reliability was estimated only in the less-frequent group. Because ICC depends on between-subject spread, the moderate estimate may not carry over to women with daily bowel movements. · stated by the authors
- Both groups had bowel habits in a relatively normal range and the data are baseline associations; the authors call for clinical populations and longitudinal interventions (e.g. diet or vagus nerve stimulation) to establish direction and causality. · stated by the authors
- Faecal SCFAs give only a partial snapshot of microbiome function, since much SCFA is absorbed or metabolised before reaching the distal colon and faeces, so faecal levels may not track vagal tone. · stated by the authors
- Group differences and correlations for cognition and MI have p = 0.01 to 0.03, and FDR correction was applied only to the SCFA analyses. The stated SCFA mediation of the bowel movement to MI link rests on two significant paths, and no indirect-effect estimate is reported in the text. · noted in this summary
- The retest visit (V3) came after a crossover intervention period and a washout of at least 4 weeks. Carryover from the intervention therefore cannot be ruled out as a contributor to the moderate MI ICC and the higher MI at retest (p = 0.05). · noted in this summary
Read this if you use EEG-electrogastrogram coupling as a gut-brain marker and want an estimate of its retest reliability, or if you study how bowel habits and faecal short-chain fatty acids relate to brain rhythms and cognition.
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