NatureNeurosciencePeer-reviewed journal article
Variability in the analysis of a single neuroimaging dataset by many teams
Rotem Botvinik‐NezeriD, Felix HolzmeisteriD, Colin F. CamereriD, Anna DreberiD, Jürgen HuberiD, Magnus JohannessoniD, Michael KirchleriD, Roni Iwanir, Jeanette A. MumfordiD, R. Alison AdcockiD, Paolo AvesaniiD, Błażej M. BączkowskiiD, Aahana BajracharyaiD, Leah BakstiD, Sheryl B. BalliD, Marco BarilariiD, Nadège BaultiD, Derek BeatoniD, Julia BeitneriD, Roland Georg BenoitiD, Ruud M. W. J. BerkersiD, Jamil P. BhanjiiD, Bharat B. BiswaliD, Sebastian Bobadilla-SuareziD, Tiago BortoliniiD, , Xiangzhen KongiD
Abstract
Data analysis workflows in many scientific domains have become increasingly complex and flexible. To assess the impact of this flexibility on functional magnetic resonance imaging (fMRI) results, the same dataset was independently analyzed by 70 teams, testing nine ex-ante hypotheses. The flexibility of analytic approaches is exemplified by the fact that no two teams chose identical workflows to analyze the data. This flexibility resulted in sizeable variation in hypothesis test results, even for teams whose statistical maps were highly correlated at intermediate stages of their analysis pipeline. Variation in reported results was related to several aspects of analysis methodology. Importantly, meta-analytic approaches that aggregated information across teams yielded significant consensus in activated regions across teams. Furthermore, prediction markets of researchers in the field revealed an overestimation of the likelihood of significant findings, even by researchers with direct knowledge of the dataset. Our findings show that analytic flexibility can have substantial effects on scientific conclusions, and demonstrate factors related to variability in fMRI. The results emphasize the importance of validating and sharing complex analysis workflows, and demonstrate the need for multiple analyses of the same data. Potential approaches to mitigate issues related to analytical variability are discussed.
- Citations
- 1,112
- FWCI
- 85.87
- Field percentile
- top 1%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Exploring the Impact of Analysis Software on Task fMRI Results
Alexander Bowring, Camille Maumet, Thomas E. Nichols·Human Brain MappingPeer-reviewed·May 2, 2019
- The multiverse of data preprocessing and analysis in graph-based fMRI: A systematic literature review of analytical choices fed into a decision support tool for informed analysis
Daniel Kristanto, Micha Burkhardt, … Andrea Hildebrandt·Neuroscience & Biobehavioral ReviewsPeer-reviewed·Aug 6, 2024
- Moving Beyond Processing and Analysis-Related Variation in Neuroscience
Xinhui Li, Nathália Bianchini Esper, … Michael Peter Milham·Nature Human BehaviourPeer-reviewed·Aug 5, 2024
- Isolating the Sources of Pipeline-Variability in Group-Level Task-fMRI results
Alexander Bowring, Thomas E. Nichols, Camille Maumet·Human Brain MappingPeer-reviewed·Nov 13, 2021
- Effect of analytical variability in estimating EEG-based functional connectivity
Sahar Allouch, Aya Kabbara, … Mahmoud Hassan·bioRxiv·Aug 17, 2023
- Numerical Uncertainty in Analytical Pipelines Lead to Impactful Variability in Brain Networks
Gregory Kiar, Yohan Chatelain, … Tristan Glatard·PLoS ONEPeer-reviewed·Nov 1, 2021