bioRxivPlant BiologyPreprint
WRKY1 mediates transcriptional crosstalk between light and nitrogen signaling pathways in Arabidopsis thaliana
S. Heerah, M. Katari, R. Penjor, G. Coruzzi, A. Marshall-Colon
Abstract
Plant responses to multiple stimuli must be integrated to trigger transcriptional cascades that lead to changes in plant metabolism and development. Light (L) and nitrogen (N) are two signaling pathways that are intimately connected to each other and to plant energy status. Here, we describe the functional role of the WRKY1 transcription factor in mediating the regulation between L and N signaling pathways in Arabidopsis thaliana. WRKY1 participates in genome-wide transcriptional reprogramming in leaves in response to individual and combined L and N signals. A regulatory network was identified, consisting of 724 genes regulated by WRKY1 and involved in both N and L signaling pathways. The loss of WRKY1 gene function has marked effects on the L and N response of genes involved in N uptake and assimilation (primary metabolism) as well as stress response pathways (secondary metabolism). Our results support a model in which WRKY1 enables plants to activate genes involved in the recycling of cellular carbon resources when L is limiting but N is abundant, and up-regulate amino acid metabolism genes when both L and N are limiting. In this potential energy conservation mechanism, WRKY1 integrates responses to N and light-energy status to trigger changes in plant metabolism.\n\nSummaryBased on transcriptome analysis, the WRKY1 transcription factor mediates regulation of nitrogen and light signaling pathways in a potential energy conservation mechanism.
- organism: Arabidopsis
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: gene regulatory network inference
- research focus: differential expression
- approach: experimental assay
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