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BioinformaticsInternational Journal of Molecular Sciences
Peer-reviewed journal article

Unraveling the Mysteries of Sleep: Exploring Phylogenomic Sleep Signals in the Recently Characterized Archaeal Phylum Lokiarchaeota near Loki's Castle

Seithikurippu Ratnas Pandi-PerumaliD, Konda Mani SaravananiD, Sayan PauliD, D. Warren SpenceiD, Saravana Babu ChidambaramiD

Abstract

Sleep is a universally conserved behavior with an elusive origin and an uncertain evolutionary purpose. Leveraging phylogenomics, we investigate the evolutionary foundations of sleep by identifying orthologs of Human sleep-related genes in the Lokiarchaeota of the Asgard superphylum. Our findings indicate a conserved suite of genes associated with energy metabolism and cellular repair, suggesting a primordial role of sleep in cellular maintenance. This data lends credence to the idea that sleep improves organismal fitness across evolutionary time by acting as a restorative process. Notably, our approach demonstrates that phylogenomics is more useful than standard phylogenetics for clarifying common evolutionary traits. By offering insight into the evolutionary history of sleep and putting forth a novel model framework for sleep research across taxa, these findings contribute to our growing understanding of the molecular foundation of sleep. This study lays the groundwork for further investigations into the importance of sleep in various organisms, which could have consequences for human health and a deeper comprehension related to the fundamental processes of life. Graphical Abstract O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=139 SRC="FIGDIR/small/621620v2_ufig1.gif" ALT="Figure 1"> View larger version (41K): org.highwire.dtl.DTLVardef@4dd502org.highwire.dtl.DTLVardef@1db82c5org.highwire.dtl.DTLVardef@6662d3org.highwire.dtl.DTLVardef@1e2268b_HPS_FORMAT_FIGEXP M_FIG C_FIG

02 /Specification & Classification

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Seithikurippu Ratnas Pandi-Perumal, Konda Mani Saravanan, D. Warren Spence+3 more·Molecular Genetics and Genomics·Jan 6, 2026· 2 citations