bioRxivNeurosciencePreprint
The geometry of the neural state space of decisions
Mauro M. Monsalve‐MercadoiD, Gabriel M StineiD, Michael Neil ShadleniD, Kenneth D. MilleriD
Abstract
How do populations of neurons collectively encode and process information during cognitive tasks? We analyze high-yield population recordings from the macaque lateral intraparietal area (LIP) during a reaction-time random-dot-motion direction-discrimination task. We find that the trajectories of neural population activity patterns during single decisions lie within a curved two-dimensional manifold. The reaction time of trajectories systematically varies along one dimension, such that slow and fast decisions trace distinct activity patterns. Trajectories transition from a deliberation stage, in which they are noisy and remain similar between the choices, to a commitment stage, in which they are far less noisy and diverge sharply for the different choices. The deliberation phase is pronounced for slower decisions and gradually diminishes as reaction time decreases. A mechanistic circuit model provides an explanation for the observed properties, and suggests the transition between stages represents a transition from more sensory-driven to more circuit-driven dynamics. It yields two striking predictions we verify in the data. First, whether neurons are more choice selective for slow or fast trials varies systematically with the retinotopic location of their response fields. Second, the slower the trial, the more saccades undershoot the choice target. The results highlight the roles of distributed and dynamic activity patterns and intrinsic circuit dynamics in the population implementation of a cognitive task.
- organism: mouse
- assay: electronic health records
- research focus: trajectory inference
- approach: statistical model
- Citations
- 6
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Behavioral demands organize a decision process into distinct yet coordinated neural representations in parietal cortex
NaYoung So, Ariel D Zylberberg, Michael Neil Shadlen·bioRxiv·Sep 18, 2026
- Direct observation of the neural computations underlying a single decision
Natalie A Steinemann, Gabriel M Stine, … Michael Neil Shadlen·eLifePeer-reviewed·Oct 18, 2024
- Slow drift of neural activity as a signature of impulsivity in macaque visual and prefrontal cortex
Benjamin R. Cowley, Adam C. Snyder, … Matthew A. Smith·NeuronPeer-reviewed·Aug 17, 2020
- Continuous attractor circuits for decision making with Laplace-domain neural representations
Chenyu Wang, Rui Cao, Marc W. Howard·bioRxiv·Aug 9, 2026
- The geometry of the representation of decision variable and stimulus difficulty in the parietal cortex
Gouki Okazawa, Christina E. Hatch, … Roozbeh Kiani·CellPeer-reviewed·Jun 24, 2021
- Neural population dynamics in dorsal premotor cortex underlying a reach decision
Pierre O. Boucher, Tian Wang, … Chandramouli Chandrasekaran·bioRxiv·Jun 30, 2022