bioRxivNeurosciencePreprint
A Statistical Model of Shared Variability in the Songbird Auditory System
Lars BuesingiD, Ana Calabrese, John Patrick CunninghamiD, Sarah M. N. WoolleyiD, Liam PaninskiiD
Abstract
Vocal communication evokes robust responses in primary auditory cortex (A1) of songbirds, and single neurons from superficial and deep regions of A1 have been shown to respond selectively to songs over complex, synthetic sounds. However, little is known about how this song selectivity arises and manifests itself on the level of networks of neurons in songbird A1. Here, we examined the network-level coding of song and synthetic sounds in A1 by simultaneously recording the responses of multiple neurons in unanesthetized zebra finches. We developed a latent factor model of the joint simultaneous activity of these neural populations, and found that the shared variability in the activity has a surprisingly simple structure; it is dominated by an unobserved latent source with one degree-of-freedom. This simple model captures the structure of the correlated activity in these populations in both spontaneous and stimulus-driven conditions, and given both song and synthetic stimuli. The inferred latent variability is strongly suppressed under stimulation, consistent with similar observations in a range of mammalian cortical regions.
- organism: zebrafish
- assay: electronic health records
- research focus: cell type annotation
- approach: statistical model
- Citations
- 2
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Spatial and Temporal Organization of Composite Receptive Fields in the Songbird Auditory Forebrain
Nasim Winchester Vahidi·bioRxiv·Jul 21, 2021
- A complex acoustical environment during development enhances auditory perception and coding efficiency in the zebra finch
Samantha M Moseley, C. Daniel Meliza·Journal of NeurosciencePeer-reviewed·Dec 27, 2024
- The zebra finch auditory cortex reconstructs occluded syllables in conspecific song
Bao Le, Margot C. Bjoring, C. Daniel Meliza·Nature CommunicationsPeer-reviewed·Sep 26, 2025
- A low-threshold potassium current enhances sparseness and reliability in a model of avian auditory cortex
Margot C. Bjoring, C. Daniel Meliza·PLoS Computational BiologyPeer-reviewed·Jan 28, 2019
- Organization, Neuronal Composition, and Dynamics of Neuronal Ensembles in the Songbird Auditory Forebrain
Felipe Augusto Cini da Silva, Luke Remage‐Healey·iSciencePeer-reviewed·Jul 23, 2026
- Distinct timescales for the neuronal encoding of vocal signals in a high-order auditory area
Aurore Cazala, Catherine Del Negro, Nicolas Giret·Scientific ReportsPeer-reviewed·Oct 4, 2021