henhaobio
Sign in

Physical Review LettersSystems BiologyPeer-reviewed journal article

Extrinsic noise and heavy-tailed laws in gene expression

Lucy HamiD, Rowan D. BrackstoniD, Michael P. H. StumpfiD

PDFDOIPreprint

Abstract

Noise in gene expression is one of the hallmarks of life at the molecular scale. Here we derive analytical solutions to a set of models describing the molecular mechanisms underlying transcription of DNA into RNA. Our Ansatz allows us to incorporate the effects of extrinsic noise - encompassing factors external to the transcription of the individual gene - and discuss the ramifications for heterogeneity in gene product abundance that has been widely observed in single cell data. Crucially, we are able to show that heavy-tailed distributions of RNA copy numbers cannot result from the intrinsic stochasticity in gene expression alone, but must instead reflect extrinsic sources of variability.

Citations
77
FWCI
3.32
Field percentile
top 6%

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISGorin '20Biondo '23Sun '19Lin '21Smith '21Ham '20
73% semantic matchBiophysics
G. Gorin, L. Pachter·bioRxiv·Sep 25, 2020