The Maryland Analysis of Developmental EEG (MADE) Pipeline

Abstract

Compared to adult EEG, EEG signals recorded from pediatric populations have shorter recording periods and contain more artifact contamination. Therefore, pediatric EEG data necessitate specific preprocessing approaches in order to remove environmental noise and physiological artifacts without losing large amounts of data. However, there is presently a scarcity of standard automated preprocessing pipelines suitable for pediatric EEG. In an effort to achieve greater standardization of EEG preprocessing, and in particular for the analysis of pediatric data, we developed the Maryland Analysis of Developmental EEG (MADE) pipeline as an automated preprocessing pipeline compatible with EEG data recorded with different hardware systems, different populations, levels of artifact contamination, and length of recordings. MADE uses EEGLAB and functions from some EEGLAB plugins, and includes additional customizable features particularly useful for EEG data collected from pediatric populations. MADE processes event-related and resting state EEG from raw data files through a series of preprocessing steps and outputs processed clean data ready to be analyzed in time, frequency, or time-frequency domain. MADE provides a report file at the end of the preprocessing that describes a variety of features of the processed data to facilitate the assessment of the quality of processed data. In this paper we discuss some practical issues, which are specifically relevant to pediatric EEG preprocessing. We also provide custom-written scripts to address these practical issues. MADE is freely available under the terms of the GNU General Public License at https://github.com/ChildDevLab/MADE-EEG-preprocessing-pipeline.