bioRxivZoology
Plasticity of circadian and circatidal rhythms in activity and transcriptomic dynamics in a freshwater snail
Abstract
Organisms have diverse biological clocks synchronized with environmental cycles depending on their habitats. Anticipation of tidal changes has driven the evolution of circatidal rhythms in some marine species. In a freshwater snail, Semisulcospira reiniana, individuals in nontidal areas exhibit circadian rhythms, whereas those in tidal areas exhibit both circadian and circatidal rhythms. We investigated whether the circatidal rhythms are genetically determined or induced by environmental cycles. After exposure to a simulated tidal cycle, both tidal and nontidal populations exhibited circatidal rhythms in locomotive activity. Transcriptome analysis revealed that genes with circatidal oscillation increased due to entrainment to the tidal cycle in both populations and dominant rhythmicity was consistent with the environmental cycle. These results suggest plasticity in the endogenous rhythm in both populations. However, circatidal oscillating genes were more abundant in the tidal population than in the nontidal population, suggesting that a greater number of genes are associated with circatidal clocks in the tidal population compared to the nontidal population. Our findings suggest that the plasticity of biological rhythms and genetic changes in the molecular network between clocks and downstream genes may have contributed to the adaptation to the tidal environment in S. reiniana.
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Expression of clock genes tracks daily and tidal time in brains of intertidal crustaceans Eurydice pulchra and Parhyale hawaiensis
Andrew Oliphant, Chee Ying Sia, … Michael Harvey Hastings·Current BiologyPeer-reviewed·May 8, 2025
- Circatidal control of gene expression in the deep-sea hot vent shrimp Rimicaris leurokolos
- Behavioral rhythms are bad predictors of general organismal rhythmicity
N. S. Häfker, L. Holcik, … K. Tessmar-Raible·bioRxiv·Jul 16, 2022
- CLOCK evolved in cnidaria to synchronize internal rhythms with diel environmental cues
R. Aguillon, M. Rinsky, … O. Levy·bioRxiv·Mar 30, 2023
- Social and environmental cues mask circadian activity patterns in a highly social shell-dwelling cichlid fish
Laura Fritschi, Annika L. A. Nichols, … Maxwell E. R. Shafer·bioRxiv·Aug 17, 2026
- Sensory conflict disrupts circadian rhythms in the sea anemone Nematostella vectensis.
C. A. Berger, A. M. Tarrant·bioRxiv·Apr 11, 2022