Frontiers in ImmunologyGenomicsPeer-reviewed journal article
Deciphering of Gorilla gorilla gorilla Immunoglobulin Loci in Multiple Genome Assemblies and Enrichment of IMGT Resources
Chahrazed DebbaghiD, Géraldine FolchiD, Joumana Jabado-MichaloudiD, Véronique GiudicelliiD, Σοφία ΚοσσίδαiD
Abstract
Through the analysis of immunoglobulin genes at the IGH, IGK, and IGL loci from four Gorilla gorilla gorilla genome assemblies, IMGT(R) provides an in-depth overview of these loci and their individual variations in a species closely related to humans. The similarity between gorilla and human IG gene organization allowed the assignment of gorilla IG gene names based on their human counterparts. This study revealed significant findings, including variability in the IGH locus, the presence of known and new copy number variations (CNVs), and the accurate estimation of IGHG genes. The IGK locus displayed remarkable homogeneity and lacked the gene duplication seen in humans, while the IGL locus showed a previously unconfirmed CNV in the J-C cluster. The curated data from these analyses, available on the IMGT website, enhance our understanding of gorilla immunogenetics and provide valuable insights into primate evolution.
- organism: non-human primate
- assay: whole-genome sequencing
- research focus: genome assembly
- research focus: variant calling
- research focus: database / resource
- approach: statistical model
- approach: experimental assay
- Citations
- 6
- FWCI
- 1.52
- Field percentile
- top 19%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- IMGT(R) Analysis of the Human IGH Locus: Unveiling Novel Polymorphisms and Copy Number Variations in Genome Assemblies from Diverse Ancestral Backgrounds
Ariadni Papadaki, Maria Georga, … Σοφία Κοσσίδα·NAR Genomics and BioinformaticsPeer-reviewed·Jul 4, 2025
- Characterization of Immunoglobulin Loci in Pongo abelii and Pongo pygmaeus: Insights from Multi-Genome Annotation and IMGT-Based Curation
Shamsa Batool, Guilhem Zeitoun, … Σοφία Κοσσίδα·NAR Genomics and BioinformaticsPeer-reviewed·Sep 14, 2026
- Novel Genes and Polymorphisms in Human Immunoglobulin Light Chains Across Diverse Populations Through Comprehensive IMGT(R) Analysis
Maria Georga, Ariadni Papadaki, … Σοφία Κοσσίδα·bioRxiv·Sep 25, 2025
- Genotyping Allelic and Copy Number Variation in the Immunoglobulin Heavy Chain Locus
Shishi Luo, Jane A Yu, Yun S. Song·PLOS Computational BiologyPeer-reviewed·Sep 15, 2016
- Unraveling IGK Locus in Dog Breeds: IMGT(R) New Insights into Canine Immunogenetics.
Taismara Kustro Garnica, Ariadni Papadaki, … Σοφία Κοσσίδα·NAR Genomics and BioinformaticsPeer-reviewed·Jan 6, 2026
- Human IGH germline gene diversity and allele frequencies in 2486 individuals from 25 global populations delineated by ultra-high throughput genotyping
Martin Corcoran, Sanjana Narang, … Gunilla B. Karlsson Hedestam·ImmunityPeer-reviewed·Mar 16, 2026