CellGenetic & Genomic MedicinePeer-reviewed journal article
The Polygenic and Monogenic Basis of Blood Traits and Diseases
Dragana VuckoviciD, Erik L. BaoiD, Parsa AkbariiD, Caleb A. LareauiD, Abdou MousasiD, Tao JiangiD, Ming‐Huei CheniD, Laura M. RaffieldiD, Manuel TardáguilaiD, Jennifer E. HuffmaniD, Scott C. RitchieiD, Karyn MégyiD, Hannes PonstingliD, Christopher J. PenkettiD, Patrick K. AlbersiD, Emilie M. WigdoriD, Saori SakaueiD, Arden MoscatiiD, Regina ManansalaiD, Ken Sin LoiD, Huijun QianiD, Masato AkiyamaiD, Traci M. BartziD, Yoav Ben‐ShlomoiD, Andrew David BeswickiD, , Εvangelos ΕvangelouiD
Abstract
Blood cells play essential roles in human health, underpinning physiological processes such as immunity, oxygen transport, and clotting, which when perturbed cause a significant health burden. Here we integrate data from UK Biobank and a large-scale international collaborative effort, including 563,946 European ancestry participants, and discover 5,106 new genetic variants independently associated with 29 blood cell phenotypes covering the full allele frequency spectrum of variation impacting hematopoiesis. We holistically characterize the genetic architecture of hematopoiesis, assess the relevance of the omnigenic model to blood cell phenotypes, delineate relevant hematopoietic cell states influenced by regulatory genetic variants and gene networks, identify novel splice-altering variants mediating the associations, and assess the polygenic prediction potential for blood cell traits and clinical disorders at the interface of complex and Mendelian genetics. These results show the power of large-scale blood cell GWAS to interrogate clinically meaningful variants across the full allelic spectrum of human variation.
- organism: human
- assay: bulk RNA-seq
- research focus: GWAS / association mapping
- approach: statistical model
- Citations
- 670
- FWCI
- 11.84
- Field percentile
- top 1%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Interrogation of human hematopoiesis at single-cell and single-variant resolution
Jacob C. Ulirsch, Caleb A. Lareau, … Vijay G. Sankaran·Nature GeneticsPeer-reviewed·Mar 11, 2019
- Genome-wide analyses of variance in blood cell phenotypes provide new insights into complex trait biology and prediction
Ruidong Xiang, Chief Ben-Eghan, … Michael Inouye·Nature CommunicationsPeer-reviewed·May 7, 2025
- Transcriptome-wide association study in UK Biobank Europeans identifies associations with blood cell traits.
Bryce Rowland, Sanan Venkatesh, … Yun Li·Human Molecular GeneticsPeer-reviewed·Feb 9, 2022
- Learning polygenic scores for human blood cell traits
Yu Xu, Dragana Vuckovic, … Michael Inouye·bioRxiv·Feb 17, 2020
- Comprehensive population-based genome sequencing provides insight into hematopoietic regulatory mechanisms
Michael Guo, Satish K Nandakumar, … Vijay G Sankaran·Proceedings of the National Academy of SciencesPeer-reviewed·Dec 28, 2016
- Gene-centric functional dissection of human genetic variation uncovers regulators of hematopoiesis
Satish Kumar Nandakumar, Sean McFarland, … Vijay G. Sankaran·eLifePeer-reviewed·May 9, 2019