Dispersal limitation and thermodynamic constraints govern spatial structure of permafrost microbial communities
E. M. Bottos, D. W. Kennedy, E. B. Romero, S. J. Fansler, J. M. Brown, L. M. Bramer, R. K. Chu, M. M. Tfaily, J. K. Jansson, J. C. Stegen
Abstract
Understanding drivers of permafrost microbial community composition is critical for understanding permafrost microbiology and predicting ecosystem responses to thaw, however studies describing ecological controls on these communities are lacking. We hypothesize that permafrost communities are uniquely shaped by constraints imposed by prolonged freezing, and decoupled from factors that influence non-permafrost soil communities. To test this hypothesis, we characterized patterns of environmental variation and microbial community composition in permafrost across an Alaskan boreal forest landscape. We used null modeling to estimate the relative importance of selective and neutral assembly processes on community composition, and identified environmental factors influencing ecological selection through regression and structural equation modeling (SEM). Proportionally, the strongest process influencing community composition was dispersal limitation (0.36), exceeding the influence of homogenous selection (0.21), variable selection (0.16), and homogenizing dispersal (0.05). Fe(II) content was the most important factor explaining variable selection, and was significantly associated with total selection by univariate regression (R2=0.14, p=0.003). SEM supported a model in which Fe(II) content mediated influences of the Gibbs free energy of the organic matter pool and organic acid concentration on total selection. These findings reveal that the processes shaping microbial communities in permafrost are distinct from those in non-permafrost soils, as the stability of the permafrost environment imposes dispersal and thermodynamic constraints on permafrost communities. Models of permafrost community composition will need to account for these unique drivers in order to predict community characteristics across permafrost landscapes, and in efforts to understand how pre-thaw conditions will influence post-thaw ecological and biogeochemical processes.
02 /Specification & Classification
Click any tag to browse matching papers- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Biotic versus environmental controls on microbial degradation of permafrost organic matter
Rachel Mackelprang, Michael W. Snyder, … Robert G. M. Spencer·bioRxiv·Jun 8, 2026
- Microbial Network, Phylogenetic Diversity And Community Membership In The Active Layer Across A Permafrost Thaw Gradient
R. Mondav, C. K. McCalley, … P. M. Crill·bioRxiv·May 29, 2017
- Consistent microorganisms respond during aerobic thaw of Alaskan permafrost soils
Joy M. O’Brien, Nathan D. Blais, … Jessica G. Ernakovich·bioRxiv·Aug 11, 2025
- Abrupt permafrost thaw triggers microbial bloom and grazer succession
M. Scheel, A. Zervas, … T. R. Christensen·bioRxiv·Aug 9, 2022
- Compositional Shifts and Co-occurrence Patterns of Topsoil Bacteria and Micro-Eukaryotes Across a Permafrost Thaw Gradient in Alpine Meadows of the Qilian Mountains, China
Zhu Wang, Yang Liu, Fang Wang·Applied and Environmental MicrobiologyPeer-reviewed·Feb 12, 2025
- Microbial Resuscitation and Growth Rates in Deep Permafrost: Lipid Stable Isotope Probing Results from the Permafrost Research Tunnel in Fox, Alaska
T. A. Caro, Jamie M. McFarlin, … Sebastian Kopf·Journal of Geophysical Research BiogeosciencesPeer-reviewed·Sep 1, 2025