henhaobio
Sign in

NeurocomputingBioinformaticsPeer-reviewed journal article

BayeSuites: An open web framework for massive Bayesian networks focused on neuroscience

Mario MichielsiD, Pedro LarrañagaiD, Concha BielzaiD

PDFDOIPreprint

Abstract

BayeSuites is the first web framework for learning, visualizing, and interpreting Bayesian networks (BNs) that can scale to tens of thousands of nodes while providing fast and friendly user experience. All the necessary features that enable this are reviewed in this paper; these features include scalability, extensibility, interoperability, ease of use, and interpretability. Scalability is the key factor in learning and processing massive networks within reasonable time; for a maintainable software open to new functionalities, extensibility and interoperability are necessary. Ease of use and interpretability are fundamental aspects of model interpretation, fairly similar to the case of the recent explainable artificial intelligence trend. We present the capabilities of our proposed framework by highlighting a real example of a BN learned from genomic data obtained from Allen Institute for Brain Science. The extensibility properties of the software are also demonstrated with the help of our BN-based probabilistic clustering implementation, together with another genomic-data example.

Citations
16
FWCI
1.28
Field percentile
top 17%

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISBernaola '23Azad '18Chang '25Coventry '24Almela '24Zhao '21
62% semantic matchBioinformatics
Nikolas Bernaola, Mario Michiels, Pedro Larrañaga+1 more·PLoS Computational Biology·Dec 1, 2023· 20 citations