bioRxivBioengineeringPreprint
A Convex Point Process Model of Heartbeat Dynamics for Inference, Prediction, and Information Quantification
Andrew S. PerleyiD, Matthew MartineziD, Tommaso Mercadante, Sabrina LiuiD, Todd P. ColemaniD
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Abstract
The dynamics of heartbeat intervals provide important insights into cardiovascular and autonomic nervous system function. Conventional analytical approaches often use fixed-window averaging, which can obscure rapid changes and reduce temporal resolution. Point process models address this limitation by operating in continuous time, enabling more precise characterization of heartbeat variability. A landmark example is the history-dependent inverse Gaussian (IG) point process model of Barbieri et al. (2005), which captures temporal dependencies in heartbeat timing. However, the nonconvex likelihood of the IG model complicates parameter estimation, requiring careful initialization and adding computational burden. In this work, we introduce a convex alternative: a history-dependent gamma generalized linear model (GLM) for heartbeat dynamics. Applied to a tilt-table dataset, our approach yields accurate and robust heart rate estimation. We further extend the model to two more applications: (1) sequential prediction of interbeat intervals, outperforming common machine learning algorithms, and (2) computation of information-theoretic measures demonstrating its utility in quantifying the influence of cardiac medications on heartbeat dynamics.
- organism: human
- assay: electrophysiology
- research focus: drug response / drug discovery
- research focus: differential expression
- research focus: trajectory inference
- approach: statistical model
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