bioRxivGeneticsPreprint
Pod indehiscence in common bean is associated to the fine regulation of PvMYB26 and a non-functional abscission layer
Valerio Di VittoriiD, Elena BitocchiiD, Monica RodrigueziD, Saleh AlseekhiD, Elisa BellucciiD, Laura NanniiD, Tania GioiaiD, Stefania MarzarioiD, Giuseppina LogozzoiD, Marzia RossatoiD, Concetta De QuattroiD, Maria L. Murgia, Juan José Ferreira FernándeziD, Ana Campa, Chunming XuiD, Fabio FioraniiD, Arun SampathkumariD, Anja Fröhlich, Giovanna Attene, Massimo DelledonneiD, Björn UsadeliD, Alisdair Robert FernieiD, Domenico RauiD, Roberto PapaiD
- Citations
- 7
Abstract
In legumes, pod shattering occurs when mature pods dehisce along the sutures, and detachment of the valves promotes seed dispersal. In Phaseolus vulgaris, the major locus qPD5.1-Pv for pod indehiscence was identified recently. We developed a BC4/F4 introgression line population and narrowed the major locus down to a 22.5-kb region. Here, gene expression and a parallel histological analysis of dehiscent and indehiscent pods identified an AtMYB26 orthologue as the best candidate for loss of pod shattering, on a genomic region ~11 kb downstream of the highest associated peak. Based on mapping and expression data, we propose early and fine up-regulation of PvMYB26 in dehiscent pods. Detailed histological analysis establishes that pod indehiscence is associated to the lack of a functional abscission layer in the ventral sheath, and that the key anatomical modifications associated with pod shattering in common bean occur early during pod development. We finally propose that loss of pod shattering in legumes resulted from histological convergent evolution and that this is the result of selection at orthologous loci. One-sentence summaryA non-functional abscission layer determines the loss of pod shattering; mapping data, and parallel gene expression and histological analysis support PvMYB26 as the candidate gene for pod indehiscence.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Genetic factor for twisting legume pods identified by fine-mapping of shattering-related traits in azuki bean and yard-long bean
Yu Takahashi, Alisa Kongjaimun, … Ken Naito·bioRxiv·Sep 28, 2019
- Loss of pod strings in common bean is associated with gene duplication, retrotransposon insertion, and overexpression of PvIND
- Genetic control of pod dehiscence in domesticatedcommon bean: Associations with range expansionand local aridity conditions
T. Parker, J. C. Berny Mier y Teran, … P. Gepts·bioRxiv·Jan 13, 2019
- A domestication change at PvMYB26 in common bean sheds light on the origins of Middle American agriculture
Burcu Çelebioğlu, Jayanta Kumar Roy, … Travis A. Parker·bioRxiv·May 15, 2025
- Investigating postharvest seed coat darkening in common beans: a molecular perspective beyond the major P gene
Nishat S. Islam, Sangeeta Dhaubhadel·bioRxiv·Mar 19, 2025
- Adaptive gene loss in the common bean pan-genome during range expansion and domestication
G. Cortinovis, L. Vincenzi, … R. Papa·bioRxiv·Nov 23, 2023