Classification of unlabelled observations in Species Distribution Modelling using Point Process Models.
Abstract
1O_LISpecies distribution modelling, which allows users to predict the spatial distribution of species with the use of environmental covariates, has become increasingly popular, with many software platforms providing tools to fit species distribution models. However, the species observations used in species distribution models can have varying levels of quality and can have incomplete information, such as uncertain species identity.\nC_LIO_LIIn this paper, we develop two algorithms to reclassify observations with unknown species identities which simultaneously predict different species distributions using spatial point processes. We compare the performance of the different algorithms using different initializations and parameters with models fitted using only the observations with known species identity through simulations.\nC_LIO_LIWe show that performance varies with differences in correlation among species distributions, species abundance, and the proportion of observations with unknown species identities. Additionally, some of the methods developed here outperformed the models that didnt use the misspecified data.\nC_LIO_LIThese models represent an helpful and promising tool for opportunistic surveys where misidentification happens or for the distribution of species newly separated in their taxonomy.\nC_LI
02 /Specification & Classification
Click any tag to browse matching papers- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Flexible Methods for Species Distribution Modeling with Small Samples
Brian Maitner, Robert L. Richards, … Cory Merow·EcographyPeer-reviewed·Jan 21, 2026
- A joint distribution framework to improve presence-only species distribution models by exploiting opportunistic surveys
J. M. Escamilla Molgora, L. M. Sedda, … P. M. Atkinson·bioRxiv·Jun 28, 2021
- Estimating occupancy dynamics and encounter rates with species misclassification: a semi-supervised individual-level approach
A. I. Spiers, J. A. Royle, … M. B. Joseph·bioRxiv·Mar 17, 2021
- Data quantity is more important than its spatial bias for predictive species distribution modelling
W. B. Gaul, D. Sadykova, … J. M. Yearsley·bioRxiv·May 24, 2020
- Do identification guides hold the key to speciesmisclassification by citizen scientists?
Fergus Chadwick, Daniel T. Haydon, … Otso Ovaskainen·bioRxiv·Apr 10, 2025
- Combining multiple data sources in species distribution models while accounting for spatial dependence and overfitting with combined penalised likelihood maximisation
I. Renner, J. Louvrier, O. Gimenez·bioRxiv·Aug 16, 2019