PLoS Computational BiologyNeurosciencePeer-reviewed journal article
Modeling spatial contrast sensitivity in responses of primate retinal ganglion cells to natural movies
Shashwat SridhariD, Michaela VystrčilováiD, Mohammad H. KhaniiD, Dimokratis KaramanlisiD, Helene M. SchreyeriD, Varsha RamakrishnaiD, Steffen KrüppeliD, Sören J. ZappiD, Matthias MietschiD, Alexander S. EckeriD, Tim GollischiD
Abstract
Retinal ganglion cells, the output neurons of the vertebrate retina, often display nonlinear summation of visual signals over their receptive fields. This creates sensitivity to spatial contrast, letting the cells respond to spatially structured visual stimuli even when no net change in overall illumination of the receptive field occurs. Yet, computational models of ganglion cell responses are often based on linear receptive fields, and typical nonlinear extensions, which separate receptive fields into nonlinearly combined subunits, are often cumbersome to fit to experimental data. Previous work has suggested to model spatial-contrast sensitivity in responses to flashed images by combining signals from the mean and variance of light intensity inside the receptive field. Here, we extend and adjust this spatial contrast model for application to spatiotemporal stimulation and explore its performance on spiking responses that we recorded from ganglion cells of marmosets under artificial and naturalistic movies. We show how the model can be fitted to experimental data and that it outperforms common models with linear spatial integration to different degrees for different types of ganglion cells. Finally, we use the model framework to infer the cells spatial scale of nonlinear spatial integration. Our work shows that the spatial contrast model can capture aspects of nonlinear spatial integration in the primate retina with only few free parameters. The model can be used to assess the cells functional properties under natural stimulation and provides a simple-to-obtain benchmark for comparison with more detailed nonlinear encoding models. Author SummaryOur visual experience depends on the retinas remarkable ability to detect light patterns and contrast in the world around us. Retinal ganglion cells, the output neurons of the retina, modulate their activity based on signals within small, specific regions of the visual scene, called their receptive fields. But many cells do not only encode overall brightness, summed linearly across the receptive field, but are also sensitive to local spatial contrast, that is, variations in brightness within the receptive field. Computational models that account for this nonlinear spatial integration exist, but require large amounts of data and are challenging to fit. We therefore developed the spatial contrast model, which takes a simple measure of light-intensity variations as an input, and tested it on measured responses of primate retinal ganglion cells to both artificial and naturalistic movies. The model substantially outperformed standard models with linear receptive fields, despite having only one additional tunable parameter. Furthermore, we used the model to investigate the spatial scale at which the cells integrate spatial contrast and found striking consistency across cell types. The spatial contrast model thus offers a practical tool for capturing retinal stimulus encoding and a simple-to-obtain benchmark for modeling nonlinear spatial integration.
- Citations
- 9
- FWCI
- 24.71
- Field percentile
- top 1%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Simple Model for Encoding Natural Images by Retinal Ganglion Cells with Nonlinear Spatial Integration
Jian K. Liu, Dimokratis Karamanlis, Tim Gollisch·PLoS Computational BiologyPeer-reviewed·Mar 8, 2022
- Nonlinear spatial integration underlies the diversity of retinal ganglion cell responses to natural stimuli
Dimokratis Karamanlis, Tim Gollisch·Journal of NeurosciencePeer-reviewed·Mar 4, 2021
- Functional characterization of retinal ganglion cells using tailored nonlinear modeling
Qing Shi, Pranjal Gupta, … Daniel A. Butts·Scientific ReportsPeer-reviewed·Jun 18, 2019
- Spatial Adaptation of Primate Retinal Ganglion Cells between Artificial and Natural Stimuli
Michaela Vystrčilová, Shashwat Sridhar, … Alexander S. Ecker·eNeuroPeer-reviewed·Mar 19, 2026
- Testing pseudo-linear models of responses to naturalscenes in primate retina
Alexander Heitman, Nora Brackbill, … E. J. Chichilnisky·bioRxiv·Dec 7, 2016
- Natural stimuli drive concerted nonlinear responses in populations of retinal ganglion cells
Dimokratis Karamanlis, Mohammad H. Khani, … Tim Gollisch·NaturePeer-reviewed·Nov 20, 2024