Author

Qing Shi

University of Maryland, College ParkPrimary ORCID profile (0000-0002-9914-7314 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Qing ShiiD1 paper · Beijing Institute of Technology

Biology Disciplines

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Neuroscience· 2 Developmental Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:mouse· 3 Approach:statistical model· 3 Assay:electronic health records· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1

Frequent Co-Authors

Joshua H. SingeriD· 2 shared Alexandra K. Boukhvalova· 1 shared Awais JavediD· 1 shared Brian S. ClarkiD· 1 shared Camilla SpelleriD· 1 shared Catherine J SheelyiD· 1 shared Catherine W. MorgansiD· 1 shared Colin M. WakehamiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersDevelopmental Biology

Joshua H. SingerORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Evolutionary landscape of oral microbiome over 100,000 years

Ling Zhong, Heng Li, Shuting Xia, Shichang Xie, Raffaella Bianucci, Shengkai Li, Sirirak Supa-amornkul, Camilla Speller, Qing Shi, Yinqiu Cui, Huilin Yang, Mark Achtman, Zhemin Zhou

This study traces the evolutionary changes in the human oral microbiome over 102,400 years, revealing co-evolution with cultural and medical transitions and highlighting shifts in microbial ecology and antimicrobial resistance.

bioRxiv · Nov 1, 2025 · PreprintMicrobiology

Trophoblast glycoprotein is required for efficient synaptic vesicle exocytosis from retinal rod bipolar cells.

Colin M. Wakeham, Qing Shi, Gaoying Ren, Tammie L. Haley, Robert M. Duvoisin, Henrique von Gersdorff, Catherine W. Morgans

This study investigates the role of trophoblast glycoprotein (TPBG) in retinal rod bipolar cells, finding it is required for efficient synaptic vesicle exocytosis and normal synaptic ribbon development.

Frontiers in Cellular Neuroscience · Nov 30, 2023Peer-reviewedNeuroscience

Atoh7-independent specification of retinal ganglion cell identity

Justin Brodie-Kommit, Brian S. Clark, Qing Shi, Fion Shiau, Dong Won Kim, Jennifer Langel, Catherine J Sheely, Philip A. Ruzycki, Michel Fries, Awais Javed, Michel Cayouette, Tiffany M. Schmidt, Tudor C. Badea, Tom M. Glaser, Haiqing Zhao, , Samer S Hattar

This study shows that Atoh7 is essential for RGC survival but not for their specification, as RGCs can develop without Atoh7 when apoptosis is inhibited.

Science Advances · Mar 12, 2021Peer-reviewedDevelopmental Biology

Functional characterization of retinal ganglion cells using tailored nonlinear modeling

Qing Shi, Pranjal Gupta, Alexandra K. Boukhvalova, Joshua H. Singer, Daniel A. Butts

The paper develops a statistical model to characterize retinal ganglion cell computation and identifies distinct receptive fields and cell types in mouse retinas.

Scientific Reports · Jun 18, 2019Peer-reviewedNeuroscience