PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

Martin Nørgaard; Granville James Matheson; Hanne Demant Hansen; Adam G. Thomas; Graham E. Searle; Gaia Rizzo; Mattia Veronese; Alessio Giacomel; Maqsood M. Yaqub; Mattéo Tonietto; Thomas Funck; Ashley Gillman; Hugo Boniface; Alexandre Routier; Jelle R. Dalenberg; Tobey J. Betthauser; Franklin W. Feingold; Christopher Johnson Markiewicz; Krzysztof J. Gorgolewski; Ross W. Blair; Stefan Appelhoff; Rémi Gau; Taylor Salo; Guiomar Niso; Cyril R Pernet; Christophe L. M. Phillips; Robert Oostenveld; Jean‐Dominique Gallezot; Richard E. Carson; Gitte M. Knudsen

doi:10.1038/s41597-022-01164-1

Scientific DataMar 2, 2022NeurosciencePeer-reviewed journal article

PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

Martin Nørgaard iD, Granville James Matheson iD, Hanne Demant Hansen iD, Adam G. Thomas iD, Graham E. Searle iD, Gaia Rizzo iD, Mattia Veronese iD, Alessio Giacomel iD, Maqsood M. Yaqub iD, Mattéo Tonietto iD, Thomas Funck iD, Ashley Gillman iD, Hugo Boniface iD, Alexandre Routier iD, Jelle R. Dalenberg iD, Tobey J. Betthauser iD, Franklin W. Feingold iD, Christopher Johnson Markiewicz iD, Krzysztof J. Gorgolewski iD, Ross W. Blair iD, Stefan Appelhoff iD, Rémi Gau iD, Taylor Salo iD, Guiomar Niso iD, Cyril R Pernet iD, , Melanie Ganz iD

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Abstract

The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets. It serves not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data (PET-BIDS). We describe the PET-BIDS standard in detail and share several open-access datasets curated following PET-BIDS. Additionally, we highlight several tools which are already available for converting, validating and analyzing PET-BIDS datasets.

Citations: 57

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