bioRxivPlant Biology
Capturing in-field root system dynamics with the RootTracker
J. J. Aguilar, M. Moore, L. Johnson, R. F. Greenhut, E. Rogers, D. Walker, F. O'Neil, J. L. Edwards, J. Thystrup, S. Farrow, J. B. Windle, P. N. Benfey
Abstract
Optimizing root system architecture offers a promising approach to developing stress tolerant cultivars in the face of climate change, as root systems are critical for water and nutrient uptake as well as mechanical stability. However, breeding for optimal root system architecture has been hindered by the difficulty in measuring root growth in the field. Here, we describe a technology, the RootTracker (RT), which employs capacitance touch sensors to monitor in-field root growth over time. Configured in a cylindrical shutter-like fashion around a planted seed, 264 electrodes are individually charged multiple times over the course of an experiment. Signature changes in the measured capacitance and resistance readings indicate when a root has touched or grown close to an electrode. Using the RootTracker, we have measured root system dynamics of commercial maize hybrids growing in both typical Midwest field conditions and under different irrigation regimes. We observed rapid responses of root growth to water deficits and found evidence for a "priming response" in which an early water deficit causes more and deeper roots to grow at later time periods. There was genotypic variation among hybrid maize lines in their root growth in response to drought, indicating a potential to breed for root systems adapted for different environments.
- organism: plant (other)
- assay: imaging
- research focus: ecology & biodiversity
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Measurements of maize root plasticity under water stress in hydroponic chamber
Talukder Z. Jubery, Sisi Liu, … Daniel Attinger·bioRxiv·Jul 30, 2018
- High-resolution 4D spatiotemporal analysis reveals the contributions of local growth dynamics to contrasting maize root architectures
N. Jiang, E. Floro, … C. N. Topp·bioRxiv·Oct 12, 2018
- DIRT/3D: 3D root phenotyping for field grown maize (Zea mays)
S. Liu, C. Barrow, … A. Bucksch·bioRxiv·Jun 30, 2020
- Root system growth and function response to soil temperature in maize (Zea mays L.)
R. Clark, D. Chamberlain, … C. Messina·bioRxiv·Mar 15, 2023
- High-throughput and automatic structural and developmental root phenotyping on Arabidopsis seedlings
R. Fernandez, A. Crabos, … C. Pradal·bioRxiv·Jul 13, 2022
- Dynamic Dark Root Chamber: Advancing non-invasive phenotyping of roots kept in darkness using infrared imaging
S. Pree, I. Kashkan, K. Retzer·bioRxiv·Feb 16, 2024