eLifeBioinformaticsPeer-reviewed journal article
Nomograms of Human Hippocampal Volume Shifted by Polygenic Scores
Mohammed JanahiiD, Leon AksmaniD, Jonathan M. SchottiD, Younes MokrabiD, André AltmanniD, On behalf of for the Alzheimer’s Disease Neuroimaging Initiative
- Citations
- 8
- FWCI
- 1.14
- Field percentile
- top 24%
Abstract
Nomograms are important clinical tools applied widely in both developing and aging populations. They are generally constructed as normative models identifying cases as outliers to a distribution of healthy controls. Currently used normative models do not account for genetic heterogeneity. Hippocampal Volume (HV) is a key endophenotype for many brain disorders. Here, we examine the impact of genetic adjustment on HV nomograms and the translational ability to detect dementia patients. Using imaging data from 35,686 healthy subjects aged 44 to 82 from the UK BioBank (UKBB), we built HV nomograms using gaussian process regression (GPR), extending the application age by 20 years, including dementia critical age ranges. Using HV Polygenic Scores (HV-PGS), we built genetically adjusted nomograms from participants stratified into the top and bottom 30% of HV-PGS. This shifted the nomograms in the expected directions by [~]100 mm3 (2.3% of the average HV), which equates to 3 years of normal aging. Clinical impact of genetically adjusted nomograms was investigated by comparing 818 subjects from the AD neuroimaging (ADNI) database diagnosed as either cognitively normal (CN), having mild cognitive impairment (MCI) or Alzheimers disease patients (AD). While no significant change in the survival analysis was found for MCI-to-AD conversion, an average of 4% decrease was found in intra-diagnostic-group variance, highlighting the importance of genetic adjustment in untangling phenotypic heterogeneity.
- organism: human
- assay: imaging
- research focus: benchmarking
- research focus: database / resource
- research focus: software / tool
- approach: statistical model
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