The Science of The Total EnvironmentMicrobiologyPeer-reviewed journal article
Rainwater-driven transport of matter and microbes from phyllosphere to soil in a temperate beech forest
Markus KrügeriD, Karin PotthastiD, Beate MichalzikiD, Alexander TischeriD, Martina HerrmanniD
Abstract
In forest ecosystems, the transport of organic matter including microbial cells by throughfall and stemflow represents a central linkage between the phyllosphere and soil. However, the extent and taxon-specificity of rainwater-mediated vertical transfer of microorganisms, and its relevance for matter fluxes is sparsely understood. We investigated the rainwater-driven transport of bacteria and its contribution to matter transport in bulk rainfall, throughfall, stemflow and seepage in a temperate deciduous forest and compared the transported communities to those in phyllosphere and soil. Throughfall-mediated cell fluxes equaled those in seepage below the litter layer, pointing to a substantial above-ground translocation of bacteria. Bacterial cells contributed up to 11 % and 33 % to the exported total organic carbon and total nitrogen, respectively. Bacteria affiliated with Pseudomonadaceae, Oxalobacteraceae, Hymenobacteraceae, and Sphingomonadaceae were differentially transmitted from the canopy with increased abundances in throughfall and stemflow compared to bulk rain. A small fraction of shared taxa pointed to the import, proliferation and mobilization of selected bacterial taxa between neighboring ecohydrological compartments. The genetic potential of the transported bacterial communities was strongly linked to organic matter degradation particularly of carbohydrates and proteins. Our findings extend our understanding of rainwater-mediated vertical matter transport in forest ecosystems and highlight the contribution of microbial cells to this transport especially in above-ground compartments. Strong shifts in community composition and abundance of the transported taxa between throughfall, stemflow and soil seepage are linked to differences in source communities but may also point to different mechanisms of cell detachment across compartments. HighlightsO_LIRainwater flow paths are important carriers for organic matter and microorganisms. C_LIO_LIThroughfall and stemflow contained high abundances of microbial cells. C_LIO_LIBacteria contributed up to 11 % and 33 % to exported carbon and nitrogen. C_LIO_LIBacterial taxa were selectively mobilized by throughfall, stemflow and seepage. C_LI
- assay: metagenomics
- research focus: ecology & biodiversity
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: experimental assay
- Citations
- 2
- FWCI
- 1.05
- Field percentile
- top 24%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Traversing the canopy: phenology-driven changes and within-canopy transport shape the phyllosphere microbiome in a temperate floodplain hardwood forest
Dinesh Sanka Loganathachetti, Beate Michalzik, … Martina Herrmann·bioRxiv·Mar 27, 2026
- Bacterial communities affected by experimental disturbances to canopy soils of a temperate rainforest
C. R. Dangerfield, N. M. Nadkarni, W. J. Brazelton·bioRxiv·Dec 17, 2016
- Canopy position has a stronger effect than tree species identity on phyllosphere bacterial diversity in a floodplain hardwood forest
M. Herrmann, P. Geesink, … K. Kuesel·bioRxiv·Feb 7, 2020
- Transmission mode shapes host specialization of the phyllosphere microbiome
K. M. Meyer, I. E. Muscettola, … B. Koskella·bioRxiv·May 8, 2023
- Drought and rewetting events enhance nitrate leaching and seepage-mediated translocation of microbes from beech forest soils
M. Krueger, K. Potthast, … M. Herrmann·bioRxiv·Aug 3, 2020
- Experimental evidence pointing to rain as a reservoir of tomato phyllosphere microbiota
M. E. Mechan Llontop, L. Tian, … B. A. Vinatzer·bioRxiv·Apr 8, 2021