Journal of Biomedical InformaticsBioinformaticsPeer-reviewed journal article
Hypothesis-driven modeling of the human lung-ventilator system for Acute Respiratory Distress Syndrome research
J.N. StrohiD, Bradford J. SmithiD, Peter D. SottileiD, George M. HripcsakiD, David J. AlbersiD
Abstract
Mechanical ventilation is an essential tool in the management of Acute Respiratory Distress Syndrome (ARDS), but it exposes patients to the risk of ventilator-induced lung injury (VILI). The human lung-ventilator system (LVS) involves the interaction of complex anatomy with a mechanical apparatus, which limits the achievable flexibility and fidelity needed to provide individualized clinical support by modeling lung processes. This work proposes a hypothesis-driven strategy for LVS modeling, in which robust personalization is achieved using a pre-defined parameter basis in a non-physiological model. Model inversion, here via windowed data assimilation, forges observed waveforms into interpretable parameter values that characterize the data rather than quantifying physiological processes. Inference experiments performed on human pressure waveform data indicate the flexible model accurately estimates parameters for a variety of breath types, including breaths of markedly dyssynchronous LVSs. Parameter estimates generate static characterizations of the data that are 50-70% more accurate than breath-wise single-compartment model estimates. They also retain sufficient information to distinguish between the types of breath they represent. However, the fidelity and interpetability of model characterizations are tied to parameter definitions and model resolution. These additional factors must be considered in conjunction with the objectives of specific applications, such as identifying and tracking the development of human VILI.
- Citations
- 8
- FWCI
- 1.29
- Field percentile
- top 19%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- A damaged informed lung ventilator model for ventilator waveforms
D. K. Agrawal, B. J. Smith, … D. J. Albers·bioRxiv·Oct 23, 2020
- Mathematical modeling of ventilator-induced lung inflammation
Sarah B. Minucci, Rebecca L. Heise, … Angela Reynolds·Journal of Theoretical BiologyPeer-reviewed·Oct 1, 2021
- A Novel Swine Model of the Acute Respiratory Distress Syndrome Using Clinically-Relevant Injury Exposures
M. H. Tiba, B. M. McCracken, … R. P. Dickson·bioRxiv·Jan 24, 2021
- Mechanical Ventilation induced P21 in an Acute Aging Model of Lung Injury
F. J. K. Gninzeko, C. K. Tho, … R. L. Heise·bioRxiv·Mar 8, 2022
- A Micro-scale Humanized Ventilator-on-a-Chip to Examine the Injurious Effects of Mechanical Ventilation
B. Gabela-Zuniga, V. C. Shukla, … S. N. Ghadiali·bioRxiv·Feb 26, 2024
- Age-dependent ventilator-induced lung injury: Mathematical modeling, experimental data, and statistical analysis
Quintessa Hay, Christopher Grubb, … Angela Reynolds·PLoS Computational BiologyPeer-reviewed·Feb 22, 2024