bioRxivBioengineeringPreprint
Improved Microbubble Tracking for Super-Resolution Ultrasound Localization Microscopy using a Bi-Directional Long Short-term Memory Neural Network
Xi CheniD, Matthew R. LowerisoniD, YiRang ShiniD, Yike WangiD, Zhijie DongiD, Qi YouiD, Pengfei SongiD
Abstract
Ultrasound localization microscopy (ULM) enabled high-accuracy measurements of microvessel flow beyond the resolution limit of conventional ultrasound imaging by utilizing contrast microbubbles (MBs) as point targets. Robust tracking of MBs is an essential task for fast and high-quality ULM image reconstruction. Existing MB tracking methods suffer from challenging imaging scenarios such as high-density MB distributions, fast blood flow, and complex flow dynamics. Here we present a deep learning-based MB pairing and tracking method based on a bi-directional long short-term memory neural network for ULM. The proposed method integrates multiparametric MB characteristics to facilitate more robust and accurate MB pairing and tracking. The method was validated on a simulation data set, a tissue-mimicking flow phantom, and in vivo on a mouse and rat brain.
- organism: mouse
- organism: rat
- assay: imaging
- research focus: cell type annotation
- research focus: clustering
- research focus: trajectory inference
- research focus: spatial domain detection
- approach: deep learning
- Citations
- 0
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