Clinical Cancer ResearchNeurosciencePeer-reviewed journal article
Diffusion Histology Imaging Combining Diffusion Basis Spectrum Imaging (DBSI) and Machine Learning Improves Detection and Classification of Glioblastoma Pathology
Zezhong YeiD, Richard L. PriceiD, Xiran LiuiD, Joshua Yao-Yu LiniD, Qingsong YangiD, Peng SuniD, Anthony T. WuiD, Liang You WangiD, Rowland H. HaniD, Chunyu SongiD, Ruimeng YangiD, Sam E. GaryiD, Diane D. Mao, Michael WallendorfiD, Jian Li CampianiD, Jr-Shin LiiD, Sonika M DahiyaiD, Albert H. KimiD, Sheng‐Kwei SongiD
Abstract
PurposeGlioblastoma (GBM) is one of the deadliest cancers with no cure. While conventional MRI has been widely adopted for examining GBM clinically, accurate neuroimaging assessment of tumor histopathology for improved diagnosis, surgical planning, and treatment evaluation, remains an unmet need in the clinical management of GBMs. Experimental DesignWe employ a novel Diffusion Histology Imaging (DHI) approach, combining diffusion basis spectrum imaging (DBSI) and machine learning, to detect, differentiate, and quantify areas of high cellularity, tumor necrosis, and tumor infiltration in GBM. ResultsGd-enhanced T1W or hyper-intense FLAIR failed to reflect the morphological complexity underlying tumor in GBM patients. Contrary to the conventional wisdom that apparent diffusion coefficient (ADC) negatively correlates with increased tumor cellularity, we demonstrate disagreement between ADC and histologically confirmed tumor cellularity in glioblastoma specimens, whereas DBSI-derived restricted isotropic diffusion fraction positively correlated with tumor cellularity in the same specimens. By incorporating DBSI metrics as classifiers for a supervised machine learning algorithm, we accurately predicted high tumor cellularity, tumor necrosis, and tumor infiltration with 87.5%, 89.0% and 93.4% accuracy, respectively. ConclusionOur results suggest that DHI could serve as a favorable alternative to current neuroimaging techniques for guiding biopsy or surgery as well as monitoring therapeutic response in the treatment of glioblastoma. Translational RelevanceCurrent clinical diagnosis, surgical planning, and assessment of treatment response for GBM patients relies heavily on gadolinium-enhanced T1-weighted MRI, which is non-specific for tumor growth and merely reflects a disrupted blood-brain barrier. The complex tumor microenvironment and spatial heterogeneity make GBM difficult to characterize using current clinical imaging modalities. In this study, we developed a novel imaging technique to characterize and accurately predict key histological features of GBM - high tumor cellularity, tumor necrosis, and tumor infiltration. While further validation in a larger cohort of patients is needed, the current proof-of-concept approach could provide a solution to resolve important clinical questions such as the identification of true tumor progression vs. pseudoprogression or radiation necrosis.
- organism: human
- assay: imaging
- research focus: differential expression
- research focus: cell type annotation
- research focus: spatial domain detection
- approach: machine learning (classical)
- Citations
- 40
- FWCI
- 2.31
- Field percentile
- top 10%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Diffusion Basis Spectrum Imaging with Deep Neural Network Differentiates Distinct Histology in Pediatric Brain Tumors
Zezhong Ye, Komal K. Srinivasa, … Joshua B. Rubin·bioRxiv·Apr 2, 2020
- Glioma Grade Map: A Machine-Learning Based Imaging Biomarker For Tumor Characterization
András Jakab, Péter Molnár, … Ervin Berényi·bioRxiv·May 2, 2017
- Intratumoral Heterogeneity of Tumor Infiltration of Glioblastoma Revealed by Joint Histogram Analysis of Diffusion Tensor Imaging
Chao Li, Shuo Wang, … Stephen John Price·NeurosurgeryPeer-reviewed·Aug 7, 2018
- Multi-Parametric and Multi-Regional Histogram Analysis of MRI: Revealing Imaging Phenotypes of Glioblastoma Correlated with Patient Survival
Chao Li, Shuo Wang, … Stephen John Price·bioRxiv·Dec 18, 2017
- Radio-pathomic maps of cell density identify glioma invasion beyond traditional MR imaging defined margins
Samuel A. Bobholz, Allison K. Lowman, … Peter S. LaViolette·bioRxiv·Apr 7, 2021
- Graph-based modeling of multiparametric MRI deciphers molecular states of high-grade glioma invasion with prognostic implications
M. J. Flick, M. Kenaston, … L. S. Hu·bioRxiv·Jul 8, 2026