bioRxivNeurosciencePreprint
Improving Multichannel Raw Electroencephalography-based Diagnosis of Major Depressive Disorder by Pretraining Deep Learning Models with Single Channel Sleep Stage Data
Charles A. EllisiD, Abhinav Sattiraju, Robyn L. MilleriD, Vince D. CalhouniD
Abstract
As the field of deep learning has grown in recent years, its application to the domain of raw resting-state electroencephalography (EEG) has also increased. Relative to traditional machine learning methods or deep learning methods applied to extracted features, there are fewer methods for developing deep learning models on small raw EEG datasets. One potential approach for enhancing deep learning performance in this case is the use of transfer learning. In this study, we propose a novel EEG transfer learning approach wherein we first train a model on a large publicly available sleep stage classification dataset. We then use the learned representations to develop a classifier for automated major depressive disorder diagnosis with raw multichannel EEG. We find that our approach improves model performance, and we further examine how transfer learning affected the representations learned by the model through a pair of explainability analyses. Our proposed approach represents a significant step forward for the domain raw resting-state EEG classification. Furthermore, it has the potential to expand the use of deep learning methods across more raw EEG datasets and lead to the development of more reliable EEG classifiers. Clinical RelevanceThe proposed approach takes the field of deep learning in EEG a step closer to the robustness needed for clinical implementation.
- assay: electronic health records
- research focus: differential expression
- approach: deep learning
- approach: contrastive learning
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Improving Multichannel Raw Electroencephalography-based Diagnosis of Major Depressive Disorder via Transfer Learning with Single Channel Sleep Stage Data
Charles A. Ellis, Abhinav Sattiraju, … Vince D. Calhoun·IEEE International Conference on Bioinformatics and Biomedicine (BIBM)Peer-reviewed·Dec 5, 2023
- Cross-Sampling Rate Transfer Learning for Enhanced Raw EEG Deep Learning Classifier Performance in Major Depressive Disorder Diagnosis
Charles A. Ellis, Robyn L. Miller, Vince D. Calhoun·IEEE International Symposium on Biomedical Imaging (ISBI)Peer-reviewed·May 27, 2024
- A Framework for Systematically Evaluating the Representations Learned by A Deep Learning Classifier from Raw Multi-Channel Electroencephalogram Data
Charles A. Ellis, Abhinav Sattiraju, … Vince D. Calhoun·bioRxiv·Mar 20, 2023
- Identifying EEG Biomarkers of Depression with Novel Explainable Deep Learning Architectures
Charles A. Ellis, Martina Lapera Sancho, … Vince D. Calhoun·Communications in computer and information sciencePeer-reviewed·Jan 1, 2024
- Evaluating Augmentation Approaches for Deep Learning-based Major Depressive Disorder Diagnosis with Raw Electroencephalogram Data
Charles A. Ellis, Robyn L. Miller, Vince D. Calhoun·Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)Peer-reviewed·Jul 15, 2024
- SingleChannelNet: A Model for Automatic Sleep Stage Classification with Raw Single-Channel EEG