bioRxivBioinformaticsPreprint
Understanding the mechanism of Trikatu in type 2 diabetes mellitus and lipid-related metabolic disorders: A network pharmacology approach
Varun ChhabraiD, Mohit WadhawaniD, Amit KatiyariD, Bharat Krushna KhuntiaiD, Vandna SharmaiD, Shubhangi RathoreiD, Punit KauriD, Gautam SharmaiD
Abstract
ObjectiveTrikatu is an Indian polyherbal formulation comprising three herbs, i.e., Zingiber officinale, Piper longum, and Piper nigrum. It is traditionally used to treat metabolic disorders such as type 2 diabetes mellitus (T2DM), dyslipidemia, and obesity. However, its mechanism of action remains unknown. This study aims to explore the underlying therapeutic mechanism of Trikatu in T2DM and lipid metabolic disorders using network pharmacology (NP). MethodsTrikatu phytochemicals were retrieved from various databases and screened on the basis of druglikeness and oral bioavailability (>30%) score. Putative targets of the bioactive phytochemicals were identified using TargetNet, Similarity Ensemble Approach, and Swiss Target Prediction databases. Protein-protein interaction (PPI) network of overlapping targets of phytochemicals and metabolic disorders was constructed using NetworkAnalyst 3.0. The Bioactive Phytochemical-Target-Pathway (BP-T-P) network was constructed using cytoscape v3.8.2, and the key targets of Trikatu were analyzed by Gene Ontology (GO), and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment. ResultsTwenty bioactive phytochemicals and 102 targets of Trikatu were identified. PPI network and enrichment analysis showed that 51 targets of Trikatu phytochemicals such as RXRA, STAT3 and ESR1, GSK3B, TNF, NOS2/3 regulate pathways like insulin resistance, steroid hormone biosynthesis, regulation of lipolysis in adipocytes, adipocytokine & cGMP-PKG signalling pathways, arachidonic acid metabolism and bile secretion. The results were validated by molecular docking which showed that RXRA, STAT3 and ESR1 strongly interact with their ligands alpha gurjunene, beta-sitosterol, piperlongumine, genistein and E-beta carotene, respectively. ConclusionHence, the multiple target and multiple pathway approach of Trikatu can be further explored in pharmacokinetics / Pharmacodynamics studies.
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- PROTECTIVE EFFECTS OF TRITERPENOID BETULIN ON TYPE 2 DIABETES MELLITUS IN RATS
A. H. Shlyahtun, Y. Z. Maksimchyk, … M. Tomulewicz·bioRxiv·Jul 27, 2023
- Herbal medicine of Kursi Wufarikun Ziyabit inhibits mitochondrial ATP production to activate AMPK in hepatocytes in therapy of type 2 diabetes
M. Yasen, L. Jiang, … H. A. Aisa·bioRxiv·Sep 28, 2020
- LC/MS-QToF Profiling, Anti-Diabetic and Anti-Adipogenic potential of Divya MadhuKalp: A Novel Herbo-mineral Formulation
A. Balkrishna, A. Joshi, … C. S. Joshi·bioRxiv·Feb 15, 2020
- Network Pharmacology Integrated Molecular Docking Based Prediction of Active Compounds and Potential Targets in Tinospora crispa Linn. as Insulin Sensitizer
Ummu Mastna Zuhri, Erni Hernawati Purwaningsih, … Nancy Dewi Yuliana·bioRxiv·May 5, 2021
- An Anti-diabetic Nutraceutical enhances muscle cell glucose uptake of cardiometabolic drugs
- Computational screening of potential AT1R inhibitors from Nigella sativa for diabetic-hypertensive therapy
Tonima Rahman Tuli, Mijan Mia, … Md. Mohaimenul Islam Tareq·bioRxiv·Aug 30, 2024