bioRxivPlant Biology
Fractal-Thermodynamic System Analogy and Complexity of Plant Leaves
Abstract
More precise measurements of the complexity of leaf shapes can open new pathways to understanding plant adaptation and resilience in the face of changing environments. We present a method to measure the complexity of plant leaf shapes by relating their fractal dimensions to topological entropy. Our method relies on segmental fractal complexity and stems from a fractal-thermodynamic system analogy. The complexity of plant leaf shapes is an algebraic combination of the fractal dimensions of the components of the leaf-image system. We applied this method to leaf forms of 30 tropical plant species. While topological entropy is positively correlated with the leaf dissection index, it is an improvement over the leaf dissection index because of its ability to capture the spatial positioning of the leaf lamina, the leaf edges, and the leaf background. The topological entropy method is also an advancement over conventional geometric and fractal dimension-based measures of leaf complexity because it does not entail information loss due to the pre-processing and is perceptibly simple.
- organism: plant (other)
- assay: imaging
- research focus: cell type annotation
- research focus: clustering
- research focus: dimensionality reduction
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Introducing entropy-based metrics for quantifying edge- and macro-shape complexity in leaves and beyond
Tobias Trauden, Anjaharinony A. N. A. Rakotomalala, … Stefan Pinkert·bioRxiv·Aug 27, 2026
- Persistent homology demarcates a leaf morphospace
M. Li, H. An, … D. H. Chitwood·bioRxiv·Jun 20, 2017
- Landscape structural complexity influences the global distribution of ecosystems and people
James Cant, Nina M. D. Schiettekatte, … Maria Dornelas·bioRxiv·Dec 28, 2024
- Morphological plant modeling: Unleashing geometric and topological potential within the plant sciences
A. Bucksch, A. Atta-Boateng, … D. Chitwood·bioRxiv·Feb 8, 2017
- Procrustean pseudo-landmark methods in Python to measure massive quantities of leaf shape data
Asia T. Hightower, Svea Hall, … Daniel H. Chitwood·Applications in Plant SciencesPeer-reviewed·Mar 1, 2026
- Geometric and Topological Approaches to Shape Variation in Ginkgo Leaves