Topic · Ecology · Environmental Science
Coral and Marine Ecosystems Studies
OpenAlex topic; a paper is listed when OpenAlex scores it at least 0.5 for this topic.
199 papers
- EcologyEnvironmental Science & TechnologyPeer-reviewed
Thermal preconditioning modulates coral physiology and heat tolerance: A multi-species perspective
Erik F. Ferrara, Anna Roik, Franziska Wöhrmann-Zipf, Maren Ziegler
This study assesses how thermal preconditioning affects thermal tolerance and baseline physiology across six coral species, finding species-specific responses and trade-offs in physiological baselines.
11 citationstop 4% - GenomicsGigabytePeer-reviewed
Genome assembly and annotation of Acropora pulchra from Mo'orea French Polynesia
Trinity L. Conn, Jill Ashey, Ross Cunning, Hollie M. Putnam
The paper presents the genome and DNA methylome assembly of Acropora pulchra from Moorea, French Polynesia, achieving high completeness and providing insights into its genetic and epigenetic features.
- EcologyPLoS Computational BiologyPeer-reviewed
Visualization and quantification of coral reef soundscapes using CoralSoundExplorer software
Lana Minier, Jérémy Rouch, Bamdad Sabbagh…·Rémi Emonet
The paper introduces CoralSoundExplorer, an open-source software tool for analyzing coral reef soundscapes using deep learning, demonstrating its ability to visualize and quantify acoustic changes in different reef environments.
8 citations - EcologyEcological ApplicationsPeer-reviewed
Going with the flow: leveraging reef-scale hydrodynamics for upscaling larval-based restoration
Marine Gouezo, Clothilde Langlais, Jack Beardsley…·Christopher Doropoulos
This study develops a 3D reef-scale dispersal model to predict larval dispersal patterns and optimize coral restoration efforts by identifying optimal collection and deployment times and locations.
14 citationstop 2% - Cell BiologySymbiosisPeer-reviewed
A novel menthol-DCMU bleaching method for foraminifera: Generating aposymbiotic hosts for symbiosis research
Christiane Schmidt, Diana Nicole Puerto Rueda, Moritz Nusser…·Simon K. Davy
This paper develops a menthol-DCMU bleaching method to generate aposymbiotic foraminifera for symbiosis research, showing effectiveness in removing symbionts from two species.
8 citations - EcologyClimate Change EcologyPeer-reviewed
Headwinds to Understanding Stress Response Physiology: A Systematic Review Reveals Mismatch between Real and Simulated Marine Heatwaves
Harmony A. Martell, Simon D. Donner
This paper reviews lab studies of coral bleaching and finds they use unrealistic heating conditions, leading to inaccurate predictions of coral responses to marine heatwaves.
1 citation - EcologyPLoS ONEPeer-reviewed
Molecular hydrogen can minimize negative effects of heat stress on the hard coral genus Acropora
Malte Ostendarp, Mareike de Breuyn, Yusuf Christian El-Khaled…·Christian Wild
This study investigates how molecular hydrogen affects heat stress in corals, finding it improves photosynthetic efficiency in Acropora spp. under elevated temperatures.
- EcologyThe American NaturalistPeer-reviewed
Seeing halos: Spatial and consumer-resource constraints to landscape of fear patterns
Theresa W. Ong, Lisa C. McManus, Vítor Vasco Lourenço de Vasconcelos…·Chenyang Su
The paper shows that coral halo patterns align with the landscape of fear hypothesis, influenced by coral spatial distribution and herbivore behavior.
4 citations - EcologyCommunications Earth & EnvironmentPeer-reviewed
Resilience in a time of stress: revealing the molecular underpinnings of coral survival following thermal bleaching events
Brook L. Nunn, Tanya Brown, E. B. Timmins-Schiffman…·Jacqueline L. Padilla‐Gamiño
This study identifies molecular biomarkers of coral resilience to thermal bleaching by comparing proteomic, microbiome, and physiological traits of surviving and dying corals.
25 citationstop 1% - Evolutionary BiologyCoral ReefsPeer-reviewed
Reconstructing the dynamics of past coral endosymbiotic algae communities using coral ancient DNA (coraDNA)
Olivier Rey, Delphine Dissard, Ève Toulza…·Jérémie Vidal‐Dupiol
This study reconstructs past Symbiodiniaceae communities in Porites lobata corals using ancient DNA, revealing stable core microbiota and changes during extreme heat events.
- Systems BiologyEnvironmental MicrobiologyPeer-reviewed
Resolving Symbiodiniaceae diversity across coral microhabitats and reef niches
Wyatt C. Million, Christian Robert Voolstra, Gabriela Perna…·Maren Ziegler
The paper compares Symbiodiniaceae communities across coral microhabitats and environmental niches using ITS2 sequencing, revealing distinct community structures and shared variants between habitats.
8 citations - EcologyPLoS ONEPeer-reviewed
Impacts of a prolonged marine heatwave and chronic local human disturbance on juvenile coral assemblages
Kristina L. Tietjen, Nelson F. Perks, Niallan C. O’Brien, Julia K. Baum
This study examines how a marine heatwave and local human disturbance affect juvenile coral densities, finding both stressors reduce densities, with competitive corals declining more than stress-tolerant ones.
- GenomicsG3 Genes Genomes GeneticsPeer-reviewed
Genomic comparison of the temperate coral Astrangia poculata with tropical corals yields insights into winter quiescence, innate immunity, and sexual reproduction
Kathryn H. Stankiewicz, Nadège Guiglielmoni, Sheila A. Kitchen…·Iliana B. Baums
This study compares the genome of the temperate coral Astrangia poculata with the tropical coral Acropora millepora to identify gene family expansions related to winter quiescence, innate immunity, and sexual reproduction.
- Evolutionary BiologyG3 Genes Genomes GeneticsPeer-reviewed
Genomes of the Caribbean reef-building corals Colpophyllia natans, Dendrogyra cylindrus, and Siderastrea siderea
Nicolas S. Locatelli, Iliana B. Baums
The paper presents the first genome assemblies for three Caribbean reef-building corals and explores genomic novelties, finding abundant gene duplications and a large genome size in Siderastrea siderea.
- MicrobiologyEnvironmental MicrobiologyPeer-reviewed
Microbiome stability is linked to coral thermotolerance
Jake Ivan P. Baquiran, John Bennedick Quijano, Madeleine J. H. van Oppen…·Cecilia Conaco
This study links microbiome stability to coral thermotolerance by comparing microbial communities in thermotolerant and thermosensitive corals under thermal stress.
24 citationstop 1% - EcologyEcological InformaticsPeer-reviewed
From local seafloor imagery to global patterns in benthic habitat states: contribution of citizen science to habitat classification across latitudes
Clément Violet, Aurélien Boyé, Sophie Dubois…·Martin Pierre Marzloff
This study uses a clustering pipeline to identify global benthic habitat states from citizen science data, revealing biogeographic patterns and temporal changes in reef ecosystems.
13 citationstop 4% - EcologyGlobal Ecology and BiogeographyPeer-reviewed
CoralBleachRisk- Global projections of coral bleaching risk in the 21st century
Camille Mellin, Stuart C. Brown, Scott F. Heron, Damien A. Fordham
The paper introduces a global dataset and tool to project coral bleaching risk from 1985 to 2100 under different climate scenarios.
8 citations - EcologyLimnology and OceanographyPeer-reviewed
Hypoxia threatens coral and sea anemone early life stages
Benjamin H. Glass, Katie L. Barott
This study examines the effects of hypoxia on early life stages of three cnidarian species, finding decreased larval performance and impaired settlement in corals, with species-specific responses to heat stress.
- Evolutionary BiologyScience AdvancesPeer-reviewed
Cryptic diversity shapes coral symbioses, physiology, and response to thermal challenge
Hannah E. Aichelman, Brooke E. Benson, Kelly Gómez-Campo…·Sarah W. Davies
The paper identifies cryptic coral lineages with functional differences in thermal tolerance and growth, highlighting their role in coral reef resilience to climate change.
18 citationstop 2% - GenomicsThe ISME JournalPeer-reviewed
Cell type-specific immune regulation under symbiosis in a facultatively symbiotic coral
Maria Valadez-Ingersoll, Hanny E. Rivera, Jeric Da‐Anoy…·Sarah W. Davies
This study investigates immune regulation in symbiotic and aposymbiotic coral tissue using multiomic approaches, revealing compartmentalized immune suppression in specific cell types during symbiosis.
8 citations - Evolutionary BiologyGenome Biology and EvolutionPeer-reviewed
Evolutionary genomics of two co-occurring congeneric fore reef coral species on Guam (Mariana Islands).
Héctor Torrado, Dareon C. Rios, Karim D. Primov…·David J. Combosch
This study compares the population genetics of two sympatric coral species on Guam, finding differences in genetic diversity and structure linked to habitat and morphology.
- EcologyThe ISME JournalPeer-reviewed
Differential aggregation patterns of Endozoicomonas within tissues of the coral Acropora loripes
Cecilie Ravn Gøtze, Ashley M. Dungan, Allison van de Meene…·Madeleine J. H. van Oppen
This study examines the spatial distribution of Endozoicomonas bacterial aggregates in Acropora loripes coral tissues, revealing distinct aggregation patterns between two phylogenetic clades.
11 citationstop 4% - EcologyEstuarine Coastal and Shelf SciencePeer-reviewed
History of recurrent short and long-term coral bleaching events in Indian coral reefs: a systematic review of contrasting bleaching patterns, lessons learned, and future directions
Thangadurai Thinesh, Kalyan De, Murugesan Sobanaa…·Anthony J. Bellantuono
This study reviews 23 years of coral bleaching events in Indian reefs to identify species susceptibility patterns and highlight the need for repeated surveys to accurately assess bleaching impacts.
- EcologyFrontiers in Marine SciencePeer-reviewed
Too hot to handle? The impact of the 2023 marine heatwave on Florida Keys coral
Karen L. Neely, Robert J. Nowicki, Michelle A. Dobler…·Kathryn A. Toth
This study examines the impact of the 2023 marine heatwave on Florida Keys corals, finding that most corals survived but some species and sites experienced significant mortality and unusual lesions.
46 citationstop 1% - GenomicsPeerJPeer-reviewed
Interspecies differences in the transcriptome response of corals to acute heat stress
Jeric Da‐Anoy, Niño Posadas, Cecilia Conaco
The paper compares transcriptome responses of four coral species to acute heat stress, finding differences in stress response gene abundance and activation patterns that correlate with thermal tolerance.
12 citations - EcologyGlobal Ecology and BiogeographyPeer-reviewed
Unravelling the universal spatial properties of coral reefs
Àlex Giménez‐Romero, Manuel A. Matı́as, Carlos Manuel Duarte
The paper identifies universal spatial patterns in coral reefs using global data, revealing fractal geometries and power-law distributions across different reef provinces.
- Systems BiologymSystemsPeer-reviewed
Metabolomic profiles of stony coral species from the Dry Tortugas National Park display inter- and intraspecies variation
Jessica M. Deutsch, Alyssa M. Demko, Olakunle A. Jaiyesimi…·Neha Garg
The paper analyzes metabolomic profiles of four stony coral species to identify inter- and intraspecies variation in host and endosymbiont-derived pathways related to disease resistance.
2 citations - Cell BiologyPLoS BiologyPeer-reviewed
Coral larvae employ nitrogen sequestration mechanisms to stabilize carbon provisioning from algal symbionts under increased temperature
Ariana S. Huffmyer, Jill Ashey, Emma Strand…·Hollie M. Putnam
This study shows coral larvae maintain carbon provisioning from algal symbionts under heat stress by sequestering nitrogen into dipeptides, reducing symbiont growth but preserving photosynthesis and carbon transfer.
24 citationstop 3% - EcologyConservation Science and PracticePeer-reviewed
Leveraging the Red List of Ecosystems for national action on coral reefs through the Kunming-Montreal Global Biodiversity Framework
Mishal Gudka, David O. Obura, Eric A. Treml…·Emily Nicholson
This paper demonstrates how the IUCN Red List of Ecosystems can guide national action on coral reef conservation under the Kunming-Montreal Global Biodiversity Framework using Kenya as a case study.