363,000+ bioRxiv and medRxiv preprints, including those later published in peer-reviewed journals, across 26 biological disciplines.
Marius Pachitariu, Carsen Stringer, Mario Dipoppa…·Kenneth D. Harris
Suite2p processes two-photon calcium movies faster than real time on desktop workstations, roughly doubling curated cell yield over CNMF and recovering 13,451 neurons in one session.
JinHyung Lee, David Carlson, Hooshmand Shokri…·Liam Paninski
A dense multi-electrode array spike sorter that triages collisions, clusters clean waveforms with a coreset Dirichlet process mixture, then deconvolves, giving more stable clusters and faster template learning than KiloSort.
Arno Klein, Satrajit Ghosh, Forrest Sheng Bao…·Anisha Keshavan
Open source Mindboggle pipeline extracts cortical folds, sulci and fundi and computes diverse shape measures, yielding normative morphometry for 101 manually labeled healthy human brains.