Author

A. Dayananda

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 3 Approach:mechanistic / dynamical model· 2 Assay:structural biology· 2 Organism:bacteria (other)· 1 Approach:experimental assay· 1 Assay:fluorescence / live-cell microscopy· 1 Approach:statistical model· 1

Frequent Co-Authors

G. Stan· 3 shared G. Haran· 1 shared H. Mazal· 1 shared H. T. S. Dennison· 1 shared H. Y. H. Fonseka· 1 shared I. Riven· 1 shared M. Damre· 1 shared M. Iljina· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersBiophysics

G. Stan

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Allosteric Communication in the Gating Mechanism for Controlled Protein Degradation by the Bacterial ClpP Peptidase

A. Dayananda, H. T. S. Dennison, H. Y. H. Fonseka, M. S. Avestan, Q. Wang, R. Tehver, G. Stan

This study investigates allosteric communication in the ClpP peptidase gating mechanism by analyzing conformational changes and network rewiring during pore opening.

bioRxiv · Mar 1, 2023Biophysics

Single-molecule FRET probes allosteric effects on protein-translocating pore loops of a AAA+ machine

M. Iljina, H. Mazal, A. Dayananda, Z. Zhang, G. Stan, I. Riven, G. Haran

This study uses single-molecule FRET to show that ATP hydrolysis in ClpB's nucleotide binding domains allosterically controls pore loop dynamics, revealing long-range conformational changes essential for substrate translocation.

bioRxiv · Feb 2, 2023Biophysics

Factors Underlying Asymmetric Dynamics of Disaggregase and Microtubule Severing AAA+ Machines

M. Damre, A. Dayananda, R. A. Varikoti, G. Stan, R. I. Dima

This study uses molecular dynamics simulations to analyze the asymmetric dynamics of AAA+ disaggregase and microtubule-severing proteins, revealing differences in inter-protomer coupling and substrate processing mechanisms.

bioRxiv · Nov 25, 2020Biophysics