A. P. de Souza

This study characterizes the kinome of Hevea brasiliensis, identifying 2,842 PK genes and analyzing their expression and coexpression patterns under abiotic stress conditions.

This study identifies SNPs associated with sugarcane mosaic virus resistance using GWAS and machine learning, and annotates markers to uncover biological processes involved in resistance.

The paper characterizes the common bean kinome, identifying 1,203 PKs and analyzing their classification, distribution, structure, and expression patterns using RNA-Sequencing data.

This study identifies and characterizes orphan genes in sugarcane, showing their expression patterns and stress responses, particularly under cold and osmotic stress conditions.

The paper models adaptive allele turnover and vulnerability to climate-driven habitat loss in Brazilian mangroves using genomic and environmental data.

This study integrates GWAS and multiomics approaches to identify genes and molecular interactions associated with rubber tree growth under water stress.

The paper identifies and characterizes a novel metal-dependent GH54 arabinofuranosidase from Trichoderma harzianum, showing expanded substrate specificity and potential for plant biomass degradation.

The paper identifies markers and genes associated with sugarcane yellow leaf virus resistance using genome-wide association analyses and machine learning.

The paper constructs a high-resolution linkage map with allele dosage for guinea grass, identifying QTLs for agronomic and nutritional traits and a locus controlling apomixis.

The paper investigates polyploid establishment in Zygopetalum mackayi by analyzing genetic diversity and structure across cytotypes, finding no evidence of reproductive interference and suggesting polyploidy, not apomixis, drives fitness.

This study examines molecular responses to freshwater limitation in Avicennia germinans, identifying candidate loci and functional adaptations linked to drought tolerance.

The paper examines factors influencing woody plant endemism in the Cerrado, finding support for climate stability, elevation, and central distribution patterns over soil fertility.

This study constructs the first SNP-based autotetraploid genetic map of Urochloa decumbens and identifies QTLs for spittlebug resistance, providing insights into candidate genes for molecular breeding.

This study identifies QTLs associated with resistance to three Phytophthora species in cacao using a genetic map and mixed model analysis.

This study analyzes the transcriptome of two rubber tree genotypes to identify cold tolerance strategies and markers, revealing alternative splicing mechanisms.

This study constructs a high-density genetic map and identifies QTLs for growth traits in rubber trees under suboptimal conditions, revealing key genetic factors affecting growth.

This study uses GBS to analyze SNP data from wild and cultivated rubber trees, identifying population structure and LD patterns to inform future genetic association studies.