Author

A. Zwaenepoel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 5

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Research Focus:chromatin & epigenetic regulation· 3 Organism:plant (other)· 3 Assay:whole-genome sequencing· 2 Approach:Bayesian inference· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Y. Van de Peer· 4 shared C. Fraïsse· 1 shared H. Chen· 1 shared H. Sachdeva· 1 shared S. Huang· 1 shared Y. Fang· 1 shared Z. Li· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 11 mutual co-author links

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4 shared papersEvolutionary Biology

Y. Van de Peer

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5 papers

Recent·Most cited

The genetic architecture of polygenic local adaptation and its role in shaping barriers to gene flow

A. Zwaenepoel, H. Sachdeva, C. Fraïsse

This paper derives an expression for effective migration rate under polygenic local adaptation and shows how dominance and genetic architecture affect barriers to gene flow.

bioRxiv · Sep 24, 2023Evolutionary Biology

Revisiting Ancient Polyploidy in Leptosporangiate Ferns

H. Chen, Y. Fang, A. Zwaenepoel, S. Huang, Y. Van de Peer, Z. Li

The paper reanalyzes ancient whole-genome duplication events in leptosporangiate ferns using phylogenetic methods and substitution rate corrections, identifying four WGDs and highlighting methodological uncertainties.

bioRxiv · Mar 12, 2022Evolutionary Biology

A two-type branching process model of gene family evolution

A. Zwaenepoel, Y. Van de Peer

The paper introduces a two-type branching process model to better capture gene family evolution dynamics and applies it to Drosophila, yeasts, and primates data.

bioRxiv · Mar 18, 2021 · PreprintEvolutionary Biology

Model-based detection of whole-genome duplications in a phylogeny

A. Zwaenepoel, Y. Van de Peer

This study develops a Bayesian method to detect ancient whole-genome duplications in phylogenies, overcoming limitations of existing approaches by allowing flexible model assumptions and discovering WGDs without prior hypotheses.

bioRxiv · Jan 24, 2020Evolutionary Biology

Ancient whole genome duplications and the evolution of the gene duplication and loss rate

A. Zwaenepoel, Y. Van de Peer

The paper develops a probabilistic framework for inferring ancient whole genome duplications by accounting for gene tree and reconciliation uncertainty, and applies it to land plants.

bioRxiv · Feb 20, 2019Evolutionary Biology