Author

Aditi Thakare

Institute of Bioinformatics and Applied Biotechnology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:variant calling· 2 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Subhashini SrinivasaniD· 3 shared Apoorva Ganesh· 2 shared Bibha ChoudharyiD· 2 shared Chaitali Ghosh· 2 shared Naveen KumariD· 2 shared Sampath KumariD· 2 shared Sunita SwainiD· 2 shared Suresh Ellappa SubramaniiD· 2 shared

Activity by Year

2022-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersGenomics

Subhashini SrinivasanORCID

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3 papers

Recent·Most cited

The first assembled chromosome-level genome of an individual from Karnataka, India

Anisha Mhatre, Yash Chindarkar, Apoorva Ganesh, Aditi Thakare, Prakruti Mishra, Febina Ravindran, Aditya Sharma, Subhashini Srinivasan, Bibha Choudhary

The paper presents the first chromosome-level genome assembly of an individual from Karnataka, India, and compares it to other genomes to identify genetic variations and ethnic relationships.

bioRxiv · Aug 18, 2024 · PreprintGenomics

Identification of a TNF-TNFR-like system in malaria vectors (Anopheles stephensi) likely to influence Plasmodium resistance

Subhashini Srinivasan, Chaitali Ghosh, Shrestha Das, Aditi Thakare, Siddharth Singh, Apoorva Ganesh, Harsh Mahawar, Aadhya Jaisimha, Mohanapriya Krishna, Aritra Chattopadhyay, Rishima Borah, Vikrant Singh, Soumya M, Naveen Kumar, Sampath Kumar, , Suresh Ellappa Subramani

The paper identifies a TNF-TNFR-like signaling system in Anopheles stephensi mosquitoes, suggesting a role in Plasmodium resistance, and finds structural disruptions in this system in high-vectorial-capacity strains.

Scientific Reports · Nov 9, 2022Peer-reviewedGenomics

The genome trilogy of Anopheles stephensi, an urban malaria vector, reveals structure of a locus associated with adaptation to environmental heterogeneity

Aditi Thakare, Chaitali Ghosh, Tejashwini Alalamath, Naveen Kumar, Himani Narang, Saurabh Whadgar, Kiran Paul, Shweta Shrotri, Sampath Kumar, M. Soumya, Raksha Rao, Mahul Chakraborty, Bibha Choudhary, Susanta Kumar Ghosh, Suresh Ellappa Subramani, , Subhashini Srinivasan

The paper reports the genome assembly of Anopheles stephensi, identifies a 16 Mbp inversion associated with adaptation, and shows its prevalence in both wild and laboratory populations.

Scientific Reports · Mar 4, 2022Peer-reviewedGenomics