Author

Saurabh Whadgar

Institute of Bioinformatics and Applied Biotechnology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 4

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Approach:statistical model· 3 Research Focus:genome assembly· 2 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Subhashini SrinivasaniD· 4 shared Bibha ChoudharyiD· 3 shared Kiran Paul· 3 shared Suresh Ellappa SubramaniiD· 3 shared Suvratha JayaprasadiD· 3 shared Chaitali Ghosh· 2 shared Mahul ChakrabortyiD· 2 shared Naveen KumariD· 2 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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4 shared papersGenomics

Subhashini SrinivasanORCID

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4 papers

Recent·Most cited

The genome trilogy of Anopheles stephensi, an urban malaria vector, reveals structure of a locus associated with adaptation to environmental heterogeneity

Aditi Thakare, Chaitali Ghosh, Tejashwini Alalamath, Naveen Kumar, Himani Narang, Saurabh Whadgar, Kiran Paul, Shweta Shrotri, Sampath Kumar, M. Soumya, Raksha Rao, Mahul Chakraborty, Bibha Choudhary, Susanta Kumar Ghosh, Suresh Ellappa Subramani, , Subhashini Srinivasan

The paper reports the genome assembly of Anopheles stephensi, identifies a 16 Mbp inversion associated with adaptation, and shows its prevalence in both wild and laboratory populations.

Scientific Reports · Mar 4, 2022Peer-reviewedGenomics

Hidden genomic features of an invasivemalaria vector, Anopheles stephensi

Mahul Chakraborty, Arunachalam Ramaiah, Adriana Adolfi, Paige V. Halas, Bhagyashree Kaduskar, Luna Thanh Ngo, Suvratha Jayaprasad, Kiran Paul, Saurabh Whadgar, Subhashini Srinivasan, Suresh Ellappa Subramani, Ethan Bier, Anthony Amade James, J. J. Emerson

The paper generates a high-quality genome assembly for Anopheles stephensi, identifies novel genomic features, and reveals hidden genetic elements contributing to insecticide resistance and male development.

BMC Biology · Feb 10, 2021Peer-reviewedGenomics

A near-chromosome level genome assembly of Anopheles stephensi

Afiya Razia Chida, Samathmika Ravi, Suvratha Jayaprasad, Kiran Paul, Jaysmita Saha, Chinjusha Suresh, Saurabh Whadgar, Naveen Kumar, Raksha Rao K, Chaitali Ghosh, Bibha Choudhary, Suresh Ellappa Subramani, Subhashini Srinivasan

The paper presents a chromosome-level genome assembly of Anopheles stephensi, revealing high genetic diversity and insights into olfactory receptors and chromosomal evolution.

Frontiers in Genetics · Nov 16, 2020Peer-reviewedGenomics

Classification of grain amaranths using chromosome-level genome assembly of ramdana, A. hypochondriacus

Saptarathi Deb, Suvratha Jayaprasad, Samathmika Ravi, Raksha Rao K, Saurabh Whadgar, Nivedita Hariharan, Shubham Dixit, Meeta Sunil, Bibha Choudhary, Piergiorgio Stevanato, Eswarayya Ramireddy, Subhashini Srinivasan

The paper reports a chromosome-level genome assembly of A. hypochondriacus landrace AhKP and classifies grain amaranth accessions based on SNP analysis.

Frontiers in Plant Science · Nov 10, 2020Peer-reviewedGenomics