Author

Ahmed Alaa

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 1 Research Focus:imputation· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1

Frequent Co-Authors

Andrew Chan· 1 shared Anthony PhilippakisiD· 1 shared Bing Yu· 1 shared Bruce M. PsatyiD· 1 shared Christie Mitchell BallantyneiD· 1 shared Gina Marie PelosoiD· 1 shared İlker DemireliD· 1 shared Jayna C. NicholasiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Andrew Chan

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

Machine learning cross-platform proteomic imputation enables protein quality scoring and replication of epidemiological associations

Linke Li, Ahmed Alaa, Youxin Tan, İlker Demirel, Sam Freesun Friedman, Qiayi Zha, Russell P. Tracy, Kent D. Taylor, Bing Yu, Christie Mitchell Ballantyne, Rajat Deo, Ruth F. Dubin, Michael Y. Tsai, Gina Marie Peloso, Jennifer A. Brody, , Zhi Yu

This paper develops a machine learning framework to impute cross-platform proteomic data, improving replication of epidemiological findings and protein quality scoring.

bioRxiv · May 9, 2026 · PreprintBioinformatics