Author

Alan Medlar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:non-human primate· 1 Research Focus:phylogenetics / evolution· 1 Assay:protein sequence· 1 Research Focus:sequence-to-function modeling· 1

Frequent Co-Authors

Ari Löytynoja· 2 shared Andreia Miraldo· 1 shared Chunxiang Li· 1 shared Laura Laakso· 1 shared

Activity by Year

2016-2016 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 4 mutual co-author links

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2 shared papersBioinformatics

Ari Löytynoja

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2 papers

Recent·Most cited

Co-estimation of Phylogeny-aware Alignment and Phylogenetic Tree

Chunxiang Li, Alan Medlar, Ari Löytynoja

The paper introduces Canopy, a tool for parallelized alignment that reduces guide tree biases, showing it produces more accurate alignments than existing methods.

bioRxiv · Sep 26, 2016 · PreprintBioinformatics

Glutton: large-scale integration of non-model organism transcriptome data for comparative analysis

Alan Medlar, Laura Laakso, Andreia Miraldo, Ari Löytynoja

Glutton processes transcriptome assemblies for comparative analysis by reconstructing gene-level alignments and orthologs, improving accuracy over heuristic methods.

bioRxiv · Sep 26, 2016 · PreprintBioinformatics