Author

Ali Fallahi

Northeastern University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Amr K. MakhamrehiD· 1 shared Howard GamperiD· 1 shared Meni WanunuiD· 1 shared Miten JainiD· 1 shared Mohammad Nabizadehmashhadtoroghi· 1 shared Sara H. RouhanifardiD· 1 shared Sepideh TavakoliiD· 1 shared Xinqi KangiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

Amr K. MakhamrehORCID

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Author profile →

1 paper

Recent·Most cited

Messenger-RNA Modification Standards and Machine Learning Models Facilitate Absolute Site-Specific Pseudouridine Quantification

Amr K. Makhamreh, Sepideh Tavakoli, Ali Fallahi, Xinqi Kang, Howard Gamper, Mohammad Nabizadehmashhadtoroghi, Miten Jain, Ya‐Ming Hou, Sara H. Rouhanifard, Meni Wanunu

This paper develops machine learning models to quantitatively measure pseudouridine occupancy in human mRNAs using synthetic controls, revealing site-specific requirements for accurate classification.

Scientific Reports · Sep 28, 2024Peer-reviewedGenomics