Author

Alice Cheng

University of Washington

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Charles E. Grant· 2 shared Timothy L. BaileyiD· 2 shared William Stafford NobleiD· 2 shared Anatoly UrismaniD· 1 shared Antonio Cuevas-NavarroiD· 1 shared Frank McCormickiD· 1 shared Gerardo Jimenez· 1 shared Joaquím Grego‐BessaiD· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersBioinformatics

Charles E. Grant

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Author profile →

3 papers

Recent·Most cited

Cross-species analysis of LZTR1 loss-of-function mutants demonstrates dependency to RIT1 orthologs

Antonio Cuevas-Navarro, Laura Rodríguez-Muñoz, Joaquím Grego‐Bessa, Alice Cheng, Katherine A. Rauen, Anatoly Urisman, Frank McCormick, Gerardo Jimenez, Pau Castel

The paper analyzes LZTR1 loss-of-function mutants in fruit flies and mice, showing dependency on RIT1 orthologs and haplosufficiency in mice.

eLife · Apr 25, 2022Peer-reviewedGenetics

MoMo: Discovery of statistically significant post-translational modification motifs

Alice Cheng, Charles E. Grant, William Stafford Noble, Timothy L. Bailey

MoMo provides a method to assign statistical confidence to PTM motifs, showing improved accuracy over motif-x and offering a web server and software tool.

Bioinformatics · Dec 26, 2018Peer-reviewedBioinformatics

MoMo: Discovery of post-translational modification motifs

Alice Cheng, Charles E. Grant, Timothy L. Bailey, William Stafford Noble

MoMo identifies post-translational modification motifs from mass spectrometry data using re-implemented algorithms and provides web-accessible results.

bioRxiv · Jun 27, 2017 · PreprintBioinformatics