Author

Alindrina Mangubat

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

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Adam C. EnglishiD· 1 shared Lisa Meed· 1 shared Nils McCarthy· 1 shared Robert Flickenger· 1 shared Sri Niranjan Shekar· 1 shared Surabhi MaheshwariiD· 1 shared

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2020-2020 · peak 1/yr

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1 shared paperBioinformatics

Adam C. EnglishORCID

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1 paper

Recent·Most cited

Leveraging a WGS compression and indexing format with dynamic graph references to call structural variants.

Adam C. English, Nils McCarthy, Robert Flickenger, Surabhi Maheshwari, Lisa Meed, Alindrina Mangubat, Sri Niranjan Shekar

The paper introduces a structural variant calling pipeline called BioGraph, which achieves higher sensitivity for detecting SVs compared to existing pipelines, though with lower precision.

bioRxiv · Apr 24, 2020 · PreprintBioinformatics