Author

Amritha Suresh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Organism:human· 3 Research Focus:gene regulatory network inference· 2 Approach:machine learning (classical)· 2 Assay:proteomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

Binay PandaiD· 3 shared Costerwell KhyriemiD· 2 shared Gangotri Siddappa· 2 shared Jayalakshmi Nair· 2 shared Kunal Dhas· 2 shared Moni A Kuriakose· 2 shared Neeraja M Krishnan· 2 shared Saurabh GuptaiD· 2 shared

Activity by Year

2015-2015 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Binay PandaORCID

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Author profile →

3 papers

Recent·Most cited

Integrated analysis links TP53, NOTCH, SLC38A and 11p with survival in patients with oral tongue squamous cell carcinoma

Neeraja M Krishnan, Saurabh Gupta, Costerwell Khyriem, Vinayak Palve, Amritha Suresh, Gangotri Siddappa, Vikram Kekatpure, Moni Abraham Kuriakose, Binay Panda

The paper identifies genetic and epigenetic factors associated with survival in oral tongue squamous cell carcinoma, showing their association with HPV status and specific molecular pathways.

bioRxiv · Dec 7, 2015 · PreprintGenomics

Integrated analysis of oral tongue squamous cell carcinoma identifies key variants and pathways linked to risk habits, HPV, clinical parameters and tumor recurrence

Neeraja M Krishnan, Saurabh Gupta, Vinayak Palve, Linu Varghese, Swetansu Pattnaik, Prachi Jain, Costerwell Khyriem, Arun K Hariharan, Kunal Dhas, Jayalakshmi Nair, Manisha Pareek, Venkatesh K Prasad, Gangotri Siddappa, Amritha Suresh, Vikram D Kekatpure, , Binay Panda

bioRxiv · Oct 11, 2015Genomics

An integrated transcriptomics and proteomics study of Head and Neck Squamous Cell Carcinoma – methodological and analytical considerations.

Anupama Rajan Bhat, Manoj Kumar Gupta, Priya Krithivasan, Kunal Dhas, Jayalakshmi Nair, Ram Bhupal Reddy, Sudheendra HV, Sandip Chavan, Harsha Vardhan, Sujatha Darsi, Lavanya Balakrishnan, Shanmukh Katragadda, Vikram Kekatpure, Amritha Suresh, Pramila Tata, , Ravi Sirdeshmukh

This study compares two methods for RNA and protein extraction from tumor tissues, finding that sequential extraction improves the identification of differentially expressed transcripts and proteins and enhances pathway analysis.

bioRxiv · Aug 6, 2015Cancer Biology