Author

Artemii Bakulin

Weizmann Institute of Science

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

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Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Boaz NadleriD· 1 shared Can ErgeniD· 1 shared Florian IngelfingeriD· 1 shared Giacomo CinnirellaiD· 1 shared Nathan LevyiD· 1 shared Nir YosefiD· 1 shared Pierre BoyeauiD· 1 shared

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2025-2025 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Boaz NadlerORCID

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1 paper

Recent·Most cited

scVIVA: a probabilistic framework for representation of cells and their environments in spatial transcriptomics

Nathan Levy, Florian Ingelfinger, Artemii Bakulin, Giacomo Cinnirella, Pierre Boyeau, Boaz Nadler, Can Ergen, Nir Yosef

scVIVA is a deep generative model that integrates cell-intrinsic and neighboring gene expression to produce embeddings and gene profiles, revealing spatially restricted tumor-promoting endothelial cells and niche-associated T cell states in breast cancer.

bioRxiv · Jun 1, 2025 · PreprintBioinformatics